RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 LRRTM4Q86VH4 590 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 SUGP1Q8IWZ8 645 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 FTSJ3Q8IY81 847 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 ESX1Q8N693 406 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 SLC15A4Q8N697 577 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 DNAJC5GQ8N7S2 189 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 GLIS1Q8NBF1 620 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 STT3BQ8TCJ2 826 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 OTUD7AQ8TE49 926 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 IPO4Q8TEX9 1081 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 STYXQ8WUJ0 223 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 SPSB4Q96A44 273 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 SLC7A6OSQ96CW6 309 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 NAF1Q96HR8 494 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 PRPF18Q99633 342 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 KATNAL1Q9BW62 490 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZNF341Q9BYN7 854 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 UBN1Q9NPG3 1134 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 RIC8AQ9NPQ8 531 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 HEYLQ9NQ87 328 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 HDAC9Q9UKV0 1011 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 FAM184BQ9ULE4 1060 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 TMX2Q9Y320 296 aa4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 RBM8AQ9Y5S9 174 aaKnown RBP4.49□□□□□ -1.69
TRAPPC13-208ENST00000505553 A0A087WWL8 130 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 C2orf78A6NCI8 922 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 LAMTOR5O43504 91 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZNF500O60304 480 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 BAIAP3O94812 1187 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 GRPP07492 148 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 IFIT1P09914 478 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 VSIG10L2P0DP72 767 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 XRCC6P12956 609 aaKnown RBP eCLIP4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 ATP5JP18859 108 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 CNTFP26441 200 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 PHKA1P46020 1223 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 SLC11A2P49281 568 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 HNRNPA0Q13151 305 aaKnown RBP4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 ICAM4Q14773 271 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 PCOLCEQ15113 449 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 MAPKAPK3Q16644 382 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 FAM110CQ1W6H9 321 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 PRR31Q5SQ13 230 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 AFMIDQ63HM1 303 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 KRT40Q6A162 431 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 MOGAT3Q86VF5 341 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 TMTC1Q8IUR5 882 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 CCDC117Q8IWD4 279 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 PALM2Q8IXS6 379 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 PCYOX1LQ8NBM8 494 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 FBXO18Q8NFZ0 1043 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 OR56A3Q8NH54 315 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 MDM1Q8TC05 714 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 SMCR8Q8TEV9 937 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 ASB12Q8WXK4 309 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 KATNBL1Q9H079 304 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 L2HGDHQ9H9P8 463 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 JMJD4Q9H9V9 463 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZSCAN32Q9NX65 697 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 JKAMPQ9P055 326 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 IGSF9Q9P2J2 1179 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 TCAF1Q9Y4C2 921 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 CTDP1Q9Y5B0 961 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 ATRNL1Q5VV63 1379 aa4.48□□□□□ -1.69
TRAPPC13-208ENST00000505553 CCDC196A0A1B0GTZ2 297 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 C9orf118A6NHY6 69 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 PRSS29PA6NIE9 313 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 hCG_1984214I3L0E3 225 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 KIAA0391O15091 583 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 HOXC11O43248 304 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 KCNQ3O43525 872 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 PPFIA2O75334 1257 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 SOAT2O75908 522 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 TOX4O94842 621 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 UNC5CO95185 931 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 TNFRSF6BO95407 300 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 CD4P01730 458 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 A1BGP04217 495 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 POLBP06746 335 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 SNRPA1P09661 255 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 CKMT1AP12532 417 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 ALAS1P13196 640 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 EGR1P18146 543 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 BTF3P20290 206 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 CAPN3P20807 821 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 CST5P28325 142 aaPredicted RBP4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 IL13P35225 146 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 MRE11P49959 708 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 ATXN1P54253 815 aaKnown RBP4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 APBA1Q02410 837 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 TRPC3Q13507 836 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 SLC29A2Q14542 456 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 GAGE13Q4V321 117 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 DCAF12L1Q5VU92 463 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 SULT6B1Q6IMI4 303 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 DSTYKQ6XUX3 929 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 ZNF365Q70YC5 407 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 PLEKHH3Q7Z736 793 aa4.47□□□□□ -1.69
TRAPPC13-208ENST00000505553 C2CD5Q86YS7 1000 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms