RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 SLC5A9Q2M3M2 681 aa16.91■□□□□ 0.3
PDCD6-203ENST00000505526 INTS8Q75QN2 995 aaKnown RBP16.91■□□□□ 0.3
PDCD6-203ENST00000505526 BRSK2Q8IWQ3 736 aa16.91■□□□□ 0.3
PDCD6-203ENST00000505526 FAM212AQ96EL1 285 aa16.91■□□□□ 0.3
PDCD6-203ENST00000505526 RTKNQ9BST9 563 aa16.91■□□□□ 0.3
PDCD6-203ENST00000505526 FAM126AQ9BYI3 521 aaPredicted RBP16.91■□□□□ 0.3
PDCD6-203ENST00000505526 RPF1Q9H9Y2 349 aaKnown RBP16.91■□□□□ 0.3
PDCD6-203ENST00000505526 METTL14Q9HCE5 456 aaKnown RBP16.91■□□□□ 0.3
PDCD6-203ENST00000505526 CDY1Q9Y6F8 540 aa16.91■□□□□ 0.3
PDCD6-203ENST00000505526 TPRP12270 2363 aaKnown RBP16.9■□□□□ 0.3
PDCD6-203ENST00000505526 SHISA7A6NL88 538 aa16.9■□□□□ 0.3
PDCD6-203ENST00000505526 KRT13P13646 458 aa16.9■□□□□ 0.3
PDCD6-203ENST00000505526 IGFBP6P24592 240 aaPredicted RBP16.9■□□□□ 0.3
PDCD6-203ENST00000505526 SPAG1Q07617 926 aa16.9■□□□□ 0.3
PDCD6-203ENST00000505526 TANGO2Q6ICL3 276 aa16.9■□□□□ 0.3
PDCD6-203ENST00000505526 ELSPBP1Q96BH3 223 aa16.9■□□□□ 0.3
PDCD6-203ENST00000505526 CCDC127Q96BQ5 260 aa16.9■□□□□ 0.3
PDCD6-203ENST00000505526 PARD6AQ9NPB6 346 aa16.9■□□□□ 0.3
PDCD6-203ENST00000505526 GMEB2Q9UKD1 530 aa16.9■□□□□ 0.3
PDCD6-203ENST00000505526 VWA8A3KMH1 1905 aa16.9■□□□□ 0.3
PDCD6-203ENST00000505526 ACACBO00763 2458 aa16.89■□□□□ 0.3
PDCD6-203ENST00000505526 SPTBN2O15020 2390 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 MEFVO15553 781 aaPredicted RBP16.89■□□□□ 0.29
PDCD6-203ENST00000505526 B3GAT3O94766 335 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 YARSP54577 528 aaKnown RBP16.89■□□□□ 0.29
PDCD6-203ENST00000505526 WNT7BP56706 349 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 BFSP1Q12934 665 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 PSMD6Q15008 389 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 KRT31Q15323 416 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 DCAF17Q5H9S7 520 aaPredicted RBP16.89■□□□□ 0.29
PDCD6-203ENST00000505526 POTEHQ6S545 545 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 TRIM59Q8IWR1 403 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 ANKRD20A12PQ8NF67 263 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 PLEKHO2Q8TD55 490 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 DNASE1L2Q92874 299 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 PDE11AQ9HCR9 933 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 AVENQ9NQS1 362 aaPredicted RBP16.89■□□□□ 0.29
PDCD6-203ENST00000505526 BACE2Q9Y5Z0 518 aa16.89■□□□□ 0.29
PDCD6-203ENST00000505526 GOLGA6L3A6NEY3 463 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 TMEM189-UBE2V1I3L0A0 370 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 DLATP10515 647 aaKnown RBP16.88■□□□□ 0.29
PDCD6-203ENST00000505526 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
PDCD6-203ENST00000505526 CEBPBP17676 345 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 PTPN2P17706 415 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 VAMP7P51809 220 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 DLG4P78352 724 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 POU5F1Q01860 360 aaKnown RBP16.88■□□□□ 0.29
PDCD6-203ENST00000505526 PPP2R3AQ06190 1150 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 TCERG1LQ5VWI1 586 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 ANKS3Q6ZW76 656 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 PARD3BQ8TEW8 1205 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 FNBP1Q96RU3 617 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 TUBGCP2Q9BSJ2 902 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 TOPORSQ9NS56 1045 aaPredicted RBP16.88■□□□□ 0.29
PDCD6-203ENST00000505526 TAB2Q9NYJ8 693 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 LIMA1Q9UHB6 759 aaKnown RBP16.88■□□□□ 0.29
PDCD6-203ENST00000505526 NDRG2Q9UN36 371 aaKnown RBP16.88■□□□□ 0.29
PDCD6-203ENST00000505526 CITO14578 2027 aa16.88■□□□□ 0.29
PDCD6-203ENST00000505526 TTC26A0AVF1 554 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 LACTBL1A8MY62 500 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 MAN2B1O00754 1011 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 IL18RAPO95256 599 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 TRIM49P0CI25 452 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 TRIM49CP0CI26 452 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 TDGF1P13385 188 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 TKTP29401 623 aaKnown RBP16.87■□□□□ 0.29
PDCD6-203ENST00000505526 CLCNKBP51801 687 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 NRLP54845 237 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 GRM2Q14416 872 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 GSE1Q14687 1217 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 CD300LGQ6UXG3 332 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 APTXQ7Z2E3 356 aaKnown RBP16.87■□□□□ 0.29
PDCD6-203ENST00000505526 USP37Q86T82 979 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 ZNF687Q8N1G0 1237 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 TMC2Q8TDI7 906 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 DDX27Q96GQ7 796 aaKnown RBP16.87■□□□□ 0.29
PDCD6-203ENST00000505526 BRD9Q9H8M2 597 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 PLEKHA5Q9HAU0 1116 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 RAB23Q9ULC3 237 aa16.87■□□□□ 0.29
PDCD6-203ENST00000505526 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.87■□□□□ 0.29
PDCD6-203ENST00000505526 ARHGEF37A1IGU5 675 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 LRRIQ3A6PVS8 624 aaPredicted RBP16.86■□□□□ 0.29
PDCD6-203ENST00000505526 I3L4J1 428 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 TRAPPC3O43617 180 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 SERPINC1P01008 464 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 LRG1P02750 347 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 FCARP24071 287 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 FANCCQ00597 558 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 PLCB2Q00722 1185 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 SPEM2Q0P670 501 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 PPP2R5DQ14738 602 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 SURF1Q15526 300 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 LPAL2Q16609 132 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 MAN2A1Q16706 1144 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 GLRA4Q5JXX5 417 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 C1orf220Q5T0J3 134 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 LMBRD2Q68DH5 695 aaPredicted RBP16.86■□□□□ 0.29
PDCD6-203ENST00000505526 ZNF461Q8TAF7 563 aa16.86■□□□□ 0.29
PDCD6-203ENST00000505526 SLC35C1Q96A29 364 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms