RNA–Protein interactions for RNA: ENST00000504937.5

TP53-209, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-209ENST00000504937 RAB6CQ9H0N0 254 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 KCNK9Q9NPC2 374 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 PARVAQ9NVD7 372 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 EURLQ9NYK6 297 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.47□□□□□ -0.57
TP53-209ENST00000504937 H0YCG3 227 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 GOLGA8SH3BPF8 625 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 GOLGA8MH3BSY2 632 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 EDNRBP24530 442 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 DYNLT1P63172 113 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 IRX3P78415 501 aaPredicted RBP11.47□□□□□ -0.57
TP53-209ENST00000504937 TAF5Q15542 800 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 PTPN20Q4JDL3 420 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 ICE2Q659A1 982 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 ZNF365Q70YC5 407 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 TAX1BP1Q86VP1 789 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 EMC1Q8N766 993 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 CCDC197Q8NCU1 140 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 SERPINB12Q96P63 405 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 TWNKQ96RR1 684 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 CCDC134Q9H6E4 229 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 TMEM134Q9H6X4 195 aa11.47□□□□□ -0.57
TP53-209ENST00000504937 MRPL47Q9HD33 250 aaKnown RBP11.47□□□□□ -0.57
TP53-209ENST00000504937 NXF1Q9UBU9 619 aaKnown RBP11.47□□□□□ -0.57
TP53-209ENST00000504937 A0A0G2JMZ2 1700 aa11.46□□□□□ -0.57
TP53-209ENST00000504937 LRRC37A2A6NM11 1700 aa11.46□□□□□ -0.57
TP53-209ENST00000504937 CCT8L1PA6NM43 557 aa11.46□□□□□ -0.57
TP53-209ENST00000504937 LDHAP00338 332 aaKnown RBP11.46□□□□□ -0.57
TP53-209ENST00000504937 BRAFP15056 766 aa11.46□□□□□ -0.57
TP53-209ENST00000504937 PECAM1P16284 738 aaPredicted RBP11.46□□□□□ -0.57
TP53-209ENST00000504937 TBXAS1P24557 533 aaPredicted RBP11.46□□□□□ -0.57
TP53-209ENST00000504937 RFC1P35251 1148 aaPredicted RBP11.46□□□□□ -0.57
TP53-209ENST00000504937 FAM133BQ5BKY9 247 aaKnown RBP11.46□□□□□ -0.57
TP53-209ENST00000504937 GJC2Q5T442 439 aaPredicted RBP11.46□□□□□ -0.57
TP53-209ENST00000504937 FUKQ8N0W3 1084 aa11.46□□□□□ -0.57
TP53-209ENST00000504937 KCNN1Q92952 543 aa11.46□□□□□ -0.57
TP53-209ENST00000504937 VCPIP1Q96JH7 1222 aa11.46□□□□□ -0.57
TP53-209ENST00000504937 NLRP4Q96MN2 994 aa11.46□□□□□ -0.57
TP53-209ENST00000504937 ROPN1BQ9BZX4 212 aaPredicted RBP11.46□□□□□ -0.57
TP53-209ENST00000504937 SDCBP2Q9H190 292 aa11.46□□□□□ -0.57
TP53-209ENST00000504937 ROPN1Q9HAT0 212 aaPredicted RBP11.46□□□□□ -0.57
TP53-209ENST00000504937 CPSF3Q9UKF6 684 aaKnown RBP11.46□□□□□ -0.57
TP53-209ENST00000504937 C3orf70A6NLC5 250 aaPredicted RBP11.46□□□□□ -0.58
TP53-209ENST00000504937 ASAP2O43150 1006 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 SNX3O60493 162 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 SPAG7O75391 227 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 TOM1L1O75674 476 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 OAS1P00973 400 aaKnown RBP11.46□□□□□ -0.58
TP53-209ENST00000504937 CXCL8P10145 99 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 ARSEP51690 589 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 CLCN3P51790 818 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 TRIM72Q6ZMU5 477 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 SPOCD1Q6ZMY3 1216 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 WDR49Q8IV35 697 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 FBXO16Q8IX29 292 aaPredicted RBP11.46□□□□□ -0.58
TP53-209ENST00000504937 PARP9Q8IXQ6 854 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 CHST13Q8NET6 341 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 GIPC2Q8TF65 315 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 GRK7Q8WTQ7 553 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 GPR20Q99678 358 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 WDR83Q9BRX9 315 aaKnown RBP11.46□□□□□ -0.58
TP53-209ENST00000504937 EFCC1Q9HA90 598 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 SAYSD1Q9NPB0 183 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 PDGFCQ9NRA1 345 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 KLC4Q9NSK0 619 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 GRID1Q9ULK0 1009 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 KCNH4Q9UQ05 1017 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 ZNF148Q9UQR1 794 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 SCINQ9Y6U3 715 aa11.46□□□□□ -0.58
TP53-209ENST00000504937 hCG_1818297A0A087WSY0 165 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 LRRD1A4D1F6 860 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 PIK3R2O00459 728 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 PRKCBP05771 671 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 FOXN2P32314 431 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 CDKN2BP42772 138 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 MAGEA4P43358 317 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 MGAT5Q09328 741 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 GPS1Q13098 491 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 EFTUD2Q15029 972 aaKnown RBP eCLIP11.45□□□□□ -0.581e-8■■■■■ 45.7
TP53-209ENST00000504937 TMED2Q15363 201 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 OASLQ15646 514 aaKnown RBP11.45□□□□□ -0.58
TP53-209ENST00000504937 LACTB2Q53H82 288 aaPredicted RBP11.45□□□□□ -0.58
TP53-209ENST00000504937 LDLRAD1Q5T700 205 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 ANKRD22Q5VYY1 191 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 NUGGCQ68CJ6 796 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 CDCA2Q69YH5 1023 aaPredicted RBP11.45□□□□□ -0.58
TP53-209ENST00000504937 DNAJC24Q6P3W2 148 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 DCUN1D2Q6PH85 259 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 RIOX2Q8IUF8 465 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 SUGP1Q8IWZ8 645 aaKnown RBP11.45□□□□□ -0.58
TP53-209ENST00000504937 CCDC89Q8N998 374 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 ANKLE1Q8NAG6 615 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 THOC1Q96FV9 657 aaKnown RBP11.45□□□□□ -0.58
TP53-209ENST00000504937 NIF3L1Q9GZT8 377 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 ZWILCHQ9H900 591 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 RRAGCQ9HB90 399 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 PTPRHQ9HD43 1115 aa11.45□□□□□ -0.58
TP53-209ENST00000504937 IP6K2Q9UHH9 426 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms