RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CALCAP01258 141 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ODC1P11926 461 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ATF2P15336 505 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 FECHP22830 423 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ACAT1P24752 427 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 HNRNPH3P31942 346 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 RPL34P49207 117 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 UBASH3AP57075 661 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 DLX2Q07687 328 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 HYAL1Q12794 435 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 LRMPQ12912 555 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ORC1Q13415 861 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 TRPC3Q13507 836 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 PSMD5Q16401 504 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CFAP221Q4G0U5 840 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 RNF19BQ6ZMZ0 732 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ANKS3Q6ZW76 656 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 PPM1KQ8N3J5 372 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 WDTC1Q8N5D0 677 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ZNF461Q8TAF7 563 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 RIN2Q8WYP3 895 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 NT5C1BQ96P26 610 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CDX2Q99626 313 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 LRRC3Q9BY71 257 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 STK33Q9BYT3 514 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 RHOBTB2Q9BYZ6 727 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CSNK1G1Q9HCP0 422 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 UBE2TQ9NPD8 197 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 NGRNQ9NPE2 291 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 FAM207AQ9NSI2 230 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CLEC1BQ9P126 229 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 MAGEC2Q9UBF1 373 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 STK39Q9UEW8 545 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 NOCTQ9UK39 431 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 FBXW11Q9UKB1 542 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 DNAJC12Q9UKB3 198 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 DSEQ9UL01 958 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 NENFQ9UMX5 172 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 HCFC2Q9Y5Z7 792 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 MYO16Q9Y6X6 1858 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 MTMR11A4FU01 709 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 GOLGA6L19H0YKK7 550 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 O00370 1275 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 C2CD2LO14523 706 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 TNFRSF10BO14763 440 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 PER2O15055 1255 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 LINC01565O15544 149 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 PHACTR2O75167 634 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 TBX10O75333 385 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CXCL14O95715 111 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CHRNB2P17787 502 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ATF6P18850 670 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CDK11BP21127 795 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 RFX1P22670 979 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 TBXAS1P24557 533 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 OR1D2P34982 312 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 PRKCIP41743 596 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 LHX1P48742 406 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 NDUFV1P49821 464 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ZNF75DP51815 510 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 PSMC1P62191 440 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 KRT17Q04695 432 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 SMC1AQ14683 1233 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 DRAP1Q14919 205 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 DUSP6Q16828 381 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 SPOUT1Q5T280 376 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 PPP1R26Q5T8A7 1209 aaPredicted RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ARHGAP17Q68EM7 881 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 PDE12Q6L8Q7 609 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 DSTYKQ6XUX3 929 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 SCARA5Q6ZMJ2 495 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ENOSF1Q7L5Y1 443 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 TTC30AQ86WT1 665 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 PALB2Q86YC2 1186 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CREBRFQ8IUR6 639 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 TCEAL8Q8IYN2 117 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 ZNF687Q8N1G0 1237 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 TC2NQ8N9U0 490 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 B3GALNT2Q8NCR0 500 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 MYCBPAPQ8TBZ2 947 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 EPS8L1Q8TE68 723 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 PDLIM2Q96JY6 352 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 MSLNLQ96KJ4 702 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 FAM161BQ96MY7 647 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 LSM14BQ9BX40 385 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 B3GNT5Q9BYG0 378 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 EDEM3Q9BZQ6 932 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 MRPL17Q9NRX2 175 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 RYDENQ9NUL5 291 aaKnown RBP5.27□□□□□ -1.57
LMNB1-208ENST00000504788 IL37Q9NZH6 218 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 AIPL1Q9NZN9 384 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 HSFX1Q9UBD0 423 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CYTH4Q9UIA0 394 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 GTF3C4Q9UKN8 822 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CDH9Q9ULB4 789 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 CAPN11Q9UMQ6 739 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 DAAM1Q9Y4D1 1078 aa5.27□□□□□ -1.57
LMNB1-208ENST00000504788 HELZP42694 1942 aaKnown RBP5.26□□□□□ -1.57
LMNB1-208ENST00000504788 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms