RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 SYT15Q9BQS2 421 aa15.27■□□□□ 0.04
HOXC9-202ENST00000504557 ACBD6Q9BR61 282 aa15.27■□□□□ 0.04
HOXC9-202ENST00000504557 MRPL45Q9BRJ2 306 aaKnown RBP15.27■□□□□ 0.04
HOXC9-202ENST00000504557 GZF1Q9H116 711 aaPredicted RBP15.27■□□□□ 0.04
HOXC9-202ENST00000504557 ZFP14Q9HCL3 533 aa15.27■□□□□ 0.04
HOXC9-202ENST00000504557 AVENQ9NQS1 362 aaPredicted RBP15.27■□□□□ 0.04
HOXC9-202ENST00000504557 ARHGEF3Q9NR81 526 aa15.27■□□□□ 0.04
HOXC9-202ENST00000504557 DMAC2Q9NW81 257 aa15.27■□□□□ 0.04
HOXC9-202ENST00000504557 WNT16Q9UBV4 365 aa15.27■□□□□ 0.04
HOXC9-202ENST00000504557 MYBPHLA2RUH7 354 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 PI15O43692 258 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 NPR3P17342 541 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 PLA2G5P39877 138 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 RAP1GAPP47736 663 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 CYP27A1Q02318 531 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 KCNB1Q14721 858 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 NFE2Q16621 373 aaPredicted RBP15.26■□□□□ 0.03
HOXC9-202ENST00000504557 ZNF699Q32M78 642 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 GPR158Q5T848 1215 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 GAREM2Q75VX8 874 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 C2orf15Q8WU43 125 aaKnown RBP15.26■□□□□ 0.03
HOXC9-202ENST00000504557 ASB16Q96NS5 453 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 GCNAQ96QF7 691 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 LRRC3Q9BY71 257 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 TBC1D17Q9HA65 648 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 ASB3Q9Y575 518 aa15.26■□□□□ 0.03
HOXC9-202ENST00000504557 ANAPC1Q9H1A4 1944 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 WDFY4Q6ZS81 3184 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 ECI2O75521 394 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 TRIM49P0CI25 452 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 TRIM49CP0CI26 452 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 FCARP24071 287 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 GNL1P36915 607 aaPredicted RBP15.25■□□□□ 0.03
HOXC9-202ENST00000504557 EPHA5P54756 1037 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 SMARCB1Q12824 385 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 NCOA4Q13772 614 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 ARHGAP15Q53QZ3 475 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 MDH1BQ5I0G3 518 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 SLC9A9Q8IVB4 645 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 GUF1Q8N442 669 aaKnown RBP15.25■□□□□ 0.03
HOXC9-202ENST00000504557 TTC16Q8NEE8 873 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 ENGASEQ8NFI3 743 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 SMARCD2Q92925 531 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 SMARCE1Q969G3 411 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 MYLPFQ96A32 169 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 SYAP1Q96A49 352 aaPredicted RBP15.25■□□□□ 0.03
HOXC9-202ENST00000504557 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 SLC2A4RGQ9NR83 387 aa15.25■□□□□ 0.03
HOXC9-202ENST00000504557 GABRDO14764 452 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 GADD45BO75293 160 aaPredicted RBP15.24■□□□□ 0.03
HOXC9-202ENST00000504557 SMC2O95347 1197 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 KRT13P13646 458 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 CD72P21854 359 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 WARSP23381 471 aaKnown RBP15.24■□□□□ 0.03
HOXC9-202ENST00000504557 PIK3CAP42336 1068 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 VAMP7P51809 220 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 CDH8P55286 799 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 ADAM9Q13443 819 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 ZNF667Q5HYK9 610 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 DPH6Q7L8W6 267 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 FAM186BQ8IYM0 893 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 ELSPBP1Q96BH3 223 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 FOXQ1Q9C009 403 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 SMG9Q9H0W8 520 aaKnown RBP15.24■□□□□ 0.03
HOXC9-202ENST00000504557 DPEP3Q9H4B8 488 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 BRD9Q9H8M2 597 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 CRTAC1Q9NQ79 661 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 FAM86C1Q9NVL1 165 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 RMND1Q9NWS8 449 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 HSFX1Q9UBD0 423 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
HOXC9-202ENST00000504557 CDH9Q9ULB4 789 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 TRAF3IP3Q9Y228 551 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 PCDHA5Q9Y5H7 936 aa15.24■□□□□ 0.03
HOXC9-202ENST00000504557 NCANO14594 1321 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 HEPACAM2A8MVW5 462 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 A8MXQ7 604 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 H0Y858 1186 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 DPYSL4O14531 572 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 KINO60870 393 aaKnown RBP15.23■□□□□ 0.03
HOXC9-202ENST00000504557 AKAP3O75969 853 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 MICAL2O94851 1124 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 VNN1O95497 513 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 C4BPAP04003 597 aaKnown RBP15.23■□□□□ 0.03
HOXC9-202ENST00000504557 DCNP07585 359 aaKnown RBP15.23■□□□□ 0.03
HOXC9-202ENST00000504557 AOC1P19801 751 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 BDNFP23560 247 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 RPL13P26373 211 aaKnown RBP15.23■□□□□ 0.03
HOXC9-202ENST00000504557 GDI1P31150 447 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 GRIK1P39086 918 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 PRCPP42785 496 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 GCLMP48507 274 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 RPL10AP62906 217 aaKnown RBP15.23■□□□□ 0.03
HOXC9-202ENST00000504557 UBXN2BQ14CS0 331 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 MLF2Q15773 248 aaPredicted RBP15.23■□□□□ 0.03
HOXC9-202ENST00000504557 SLC44A4Q53GD3 710 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 SPOPLQ6IQ16 392 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 VITQ6UXI7 678 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 C4orf50Q6ZRC1 276 aa15.23■□□□□ 0.03
HOXC9-202ENST00000504557 ARID3BQ8IVW6 561 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms