RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 C1orf21Q9H246 121 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 CYP4F12Q9HCS2 524 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 CCDC177Q9NQR7 707 aaPredicted RBP6.33□□□□□ -1.4
LINC02397-201ENST00000504409 MFHAS1Q9Y4C4 1052 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 MPZL2O60487 215 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 PALMO75781 387 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 SEMA3DO95025 777 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 ACLYP53396 1101 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 GNG2P59768 71 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 MVKQ03426 396 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF423Q2M1K9 1284 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 HERC4Q5GLZ8 1057 aaPredicted RBP6.33□□□□□ -1.4
LINC02397-201ENST00000504409 FAM83BQ5T0W9 1011 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 TAS2R42Q7RTR8 314 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 SH2D3CQ8N5H7 860 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 NAT14Q8WUY8 206 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 FAM111AQ96PZ2 611 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 RBM42Q9BTD8 480 aaKnown RBP6.33□□□□□ -1.4
LINC02397-201ENST00000504409 STXBP5LQ9Y2K9 1186 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 SPATA31D1Q6ZQQ2 1576 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 CPDO75976 1380 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 NEO1Q92859 1461 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 CCDC154A6NI56 674 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 USP1O94782 785 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 ANXA6P08133 673 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 PABPC4LP0CB38 370 aaKnown RBP6.33□□□□□ -1.4
LINC02397-201ENST00000504409 PTENP60484 403 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 YWHAGP61981 247 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC02397-201ENST00000504409 GRSF1Q12849 480 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC02397-201ENST00000504409 FBXO43Q4G163 708 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 HECTD3Q5T447 861 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 DEPDC1BQ8WUY9 529 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 RDH12Q96NR8 316 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 SPINK5Q9NQ38 1064 aaPredicted RBP6.33□□□□□ -1.4
LINC02397-201ENST00000504409 SERTAD1Q9UHV2 236 aa6.33□□□□□ -1.4
LINC02397-201ENST00000504409 CCNT1O60563 726 aaKnown RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 RTN2O75298 545 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 RHOBTB3O94955 611 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 NPR1P16066 1061 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 RGS7P49802 495 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 HSF2Q03933 536 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SFRP1Q8N474 314 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 KYQ8NBH2 561 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 FAM162AQ96A26 154 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 INTS2Q9H0H0 1204 aaKnown RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 UMPSP11172 480 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 VAV1P15498 845 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 ITIH1P19827 911 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 IL32P24001 234 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 METTL21CQ5VZV1 264 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SPOPLQ6IQ16 392 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 ZNF767PQ75MW2 155 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 C8orf59Q8N0T1 100 aaPredicted RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 OR5T2Q8NGG2 359 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 POF1BQ8WVV4 589 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 ARL5BQ96KC2 179 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 Q96MT0 163 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 UGT2B28Q9BY64 529 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 PANK4Q9NVE7 773 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 MAGED1Q9Y5V3 778 aaPredicted RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 PEX16Q9Y5Y5 336 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 RAD54BQ9Y620 910 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 PNPLA6Q8IY17 1366 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 EYA2O00167 538 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 RAD51BO15315 384 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 GLRA3O75311 464 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 TOP3BO95985 862 aaKnown RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 ATP2B2Q01814 1243 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 PABPC4Q13310 644 aaKnown RBP eCLIP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 RASA2Q15283 850 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 TMTC4Q5T4D3 741 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 TRIM50Q86XT4 487 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 UBXN6Q9BZV1 441 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SMURF2Q9HAU4 748 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SLC39A2Q9NP94 309 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 JCADQ9P266 1359 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 H7C1W4 665 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 EML1O00423 815 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 PDXKO00764 312 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 TRDMT1O14717 391 aaKnown RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 GNPATO15228 680 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 LRPAP1P30533 357 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 MMRN1Q13201 1228 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 MAD2L1Q13257 205 aaPredicted RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 USPL1Q5W0Q7 1092 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 PI16Q6UXB8 463 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 BBS7Q8IWZ6 715 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 ANKS1AQ92625 1134 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 MED30Q96HR3 178 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 WDR11Q9BZH6 1224 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 RIC8BQ9NVN3 520 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 IFNA14P01570 189 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SNRPAP09012 282 aaKnown RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 PDE6AP16499 860 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 STIP1P31948 543 aaKnown RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 TSNQ15631 228 aaKnown RBP6.32□□□□□ -1.4
LINC02397-201ENST00000504409 FAM118BQ9BPY3 351 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 A6NJR5 290 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SFI1A8K8P3 1242 aa6.32□□□□□ -1.4
LINC02397-201ENST00000504409 SORBS3O60504 671 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms