RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 TAAR9Q96RI9 348 aa4.91□□□□□ -1.62
PDLIM1P4-201ENST00000504327 NDC1Q9BTX1 674 aa4.91□□□□□ -1.62
PDLIM1P4-201ENST00000504327 MYLK2Q9H1R3 596 aa4.91□□□□□ -1.62
PDLIM1P4-201ENST00000504327 UNC45AQ9H3U1 944 aa4.91□□□□□ -1.62
PDLIM1P4-201ENST00000504327 GREM2Q9H772 168 aa4.91□□□□□ -1.62
PDLIM1P4-201ENST00000504327 AGO4Q9HCK5 861 aaKnown RBP4.91□□□□□ -1.62
PDLIM1P4-201ENST00000504327 TPCN1Q9ULQ1 816 aa4.91□□□□□ -1.62
PDLIM1P4-201ENST00000504327 DNM3Q9UQ16 869 aa4.91□□□□□ -1.62
PDLIM1P4-201ENST00000504327 RPRD2Q5VT52 1461 aaKnown RBP4.91□□□□□ -1.62
PDLIM1P4-201ENST00000504327 SETD5Q9C0A6 1442 aa4.9□□□□□ -1.62
PDLIM1P4-201ENST00000504327 PLA2R1Q13018 1463 aa4.9□□□□□ -1.62
PDLIM1P4-201ENST00000504327 KLHL33A6NCF5 533 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 AHRRA9YTQ3 701 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 B5MCH6 92 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZFP36P26651 326 aaKnown RBP4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PTGS2P35354 604 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FLT3LGP49771 235 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FAM193AP78312 1265 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FAM189BP81408 668 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MALLQ13021 153 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 IDI1Q13907 227 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 KIF22Q14807 665 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TUBB8Q3ZCM7 444 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MUM1L1Q5H9M0 696 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MBNL2Q5VZF2 373 aaKnown RBP4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TLDC1Q6P9B6 456 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PDZD4Q76G19 769 aaPredicted RBP4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SLC35B2Q8TB61 432 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NUP133Q8WUM0 1156 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TFAP2CQ92754 450 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 HOXB13Q92826 284 aaPredicted RBP4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SLC2A13Q96QE2 648 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 UHRF1Q96T88 793 aaPredicted RBP4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 WDR12Q9GZL7 423 aaKnown RBP4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 OSBPL5Q9H0X9 879 aaPredicted RBP4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 KCNH6Q9H252 994 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LDAHQ9H6V9 325 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RSAD1Q9HA92 442 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SMC4Q9NTJ3 1288 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RBM12Q9NTZ6 932 aaKnown RBP4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RRN3Q9NYV6 651 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TRPM5Q9NZQ8 1165 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FNIP2Q9P278 1114 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 UGGT1Q9NYU2 1555 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PIK3C2BO00750 1634 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RAB3GAP2Q9H2M9 1393 aa4.9□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PTPRTO14522 1441 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 UBR1Q8IWV7 1749 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CXorf49A8MYA2 514 aaPredicted RBP4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RASA4BC9J798 803 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RASA4O43374 803 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RECQL4O94761 1208 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SREBF1P36956 1147 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MCAMP43121 646 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SLC5A3P53794 718 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RNASE9P60153 205 aaKnown RBP4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NHLH2Q02577 135 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TNFAIP2Q03169 654 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 G3BP1Q13283 466 aaKnown RBP eCLIP4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ODF1Q14990 250 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NOMO1Q15155 1222 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ANO4Q32M45 955 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ARMC3Q5W041 872 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FAM180BQ6P0A1 224 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 C4orf50Q6ZRC1 276 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CCDC149Q6ZUS6 474 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZNF572Q7Z3I7 529 aaPredicted RBP4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CHCHD4Q8N4Q1 142 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MYCT1Q8N699 235 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 AMER2Q8N7J2 671 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ADI1Q9BV57 179 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TEX101Q9BY14 249 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 BCO1Q9HAY6 547 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TBC1D22BQ9NU19 505 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PDP2Q9P2J9 529 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GPR52Q9Y2T5 361 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PCDHGA2Q9Y5H1 932 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GPR45Q9Y5Y3 372 aa4.89□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ARHGAP23Q9P227 1491 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NEURL4Q96JN8 1562 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TBKBP1A7MCY6 615 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 M0R3H8 397 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NCAM2O15394 837 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TMCC2O75069 709 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 BAIAP3O94812 1187 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 IFIT1P09914 478 aaKnown RBP4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 AGXTP21549 392 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RAP2BP61225 183 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SEPT2Q15019 361 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 BMT2Q1RMZ1 405 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 VPS53Q5VIR6 699 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RETSATQ6NUM9 610 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 EFCAB12Q6NXP0 572 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 DRICH1Q6PGQ1 229 aaPredicted RBP4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LRRC55Q6ZSA7 311 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RHOUQ7L0Q8 258 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GDF7Q7Z4P5 450 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MRGPREQ86SM8 312 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 DPP9Q86TI2 863 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LDLRAD3Q86YD5 345 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms