RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 MGAT3Q09327 533 aa20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 GPS2Q13227 327 aa20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 PIGHQ14442 188 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 ZNF268Q14587 947 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 SOWAHAQ2M3V2 549 aa20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 FBXO47Q5MNV8 452 aa20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 DDX42Q86XP3 938 aaKnown RBP eCLIP20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 XYLT1Q86Y38 959 aa20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 KATNAL2Q8IYT4 538 aa20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 UBA3Q8TBC4 463 aa20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 PCYOX1Q9UHG3 505 aa20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 UTP11Q9Y3A2 253 aaKnown RBP20.16■□□□□ 0.82
ARHGEF28-205ENST00000503341 GOLGA8SH3BPF8 625 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 H3BQF6 201 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 MYCNP04198 464 aaPredicted RBP20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 RPLP2P05387 115 aaKnown RBP20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 CTSHP09668 335 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 OAS2P29728 719 aaKnown RBP20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 PTGIRP43119 386 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 PDCLQ13371 301 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 STILQ15468 1287 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 TTC27Q6P3X3 843 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 DPH6Q7L8W6 267 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 NIPA2Q8N8Q9 360 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 C12orf29Q8N999 325 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 TSPAN16Q9UKR8 245 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 F8VP50 259 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 DAPK3O43293 454 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 KRT3P12035 628 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 RFC1P35251 1148 aaPredicted RBP20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 PNPLA4P41247 253 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 NFX1Q12986 1120 aaKnown RBP20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 KCTD19Q17RG1 926 aaPredicted RBP20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 MAP3K21Q5TCX8 1036 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 UNC93AQ86WB7 457 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 C12orf50Q8NA57 414 aaPredicted RBP20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 ZNF560Q96MR9 790 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 TRIM51Q9BSJ1 452 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 RAB17Q9H0T7 212 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 SYNCQ9H7C4 482 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 CHST12Q9NRB3 414 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 GDAP2Q9NXN4 497 aa20.15■□□□□ 0.82
ARHGEF28-205ENST00000503341 KPNA7A9QM74 516 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 SPTLC1O15269 473 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 PFKMP08237 780 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 HOXD10P28358 340 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 SSR1P43307 286 aaKnown RBP20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 AARSP49588 968 aaKnown RBP eCLIP20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 HLTFQ14527 1009 aaKnown RBP eCLIP20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 LLGL1Q15334 1064 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 LRRC38Q5VT99 294 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 CCDC137Q6PK04 289 aaKnown RBP20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 ACOT1Q86TX2 421 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 JAMLQ86YT9 394 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 PCSK9Q8NBP7 692 aaKnown RBP20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 EXD1Q8NHP7 514 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 JOSD2Q8TAC2 188 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 MAIP1Q8WWC4 291 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 MCRS1Q96EZ8 462 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 HERPUD2Q9BSE4 406 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 LRRC19Q9H756 370 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 GOLGA2P5Q9HBQ8 144 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 PTGESO14684 152 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 TRPA1O75762 1119 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 TCF4P15884 667 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 COILP38432 576 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 PTGISQ16647 500 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 PPP1R26Q5T8A7 1209 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 DUPD1Q68J44 220 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 TSEN2Q8NCE0 465 aaKnown RBP20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 OR6B3Q8NGW1 331 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 CD99L2Q8TCZ2 262 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 RUNDC3BQ96NL0 473 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 ERP44Q9BS26 406 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 FAM114A2Q9NRY5 505 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 FAM105AQ9NUU6 356 aa20.14■□□□□ 0.81
ARHGEF28-205ENST00000503341 TAF6P49848 677 aa20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 GOLGA7BQ2TAP0 167 aa20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 LIMS2Q7Z4I7 341 aa20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 MREGQ8N565 214 aa20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 FNIP1Q8TF40 1166 aa20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 KBTBD7Q8WVZ9 684 aa20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 ZBTB9Q96C00 473 aa20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 PPP1R10Q96QC0 940 aaKnown RBP20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 NEUROG2Q9H2A3 272 aa20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 CREBZFQ9NS37 354 aa20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 DDX20Q9UHI6 824 aaKnown RBP20.13■□□□□ 0.81
ARHGEF28-205ENST00000503341 GPR182O15218 404 aa20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 LRPAP1P30533 357 aa20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 THPOP40225 353 aa20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 FNTAP49354 379 aa20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 ATP13A4Q4VNC1 1196 aa20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 PKDCCQ504Y2 493 aa20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 CCDC50Q8IVM0 306 aa20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 DPH5Q9H2P9 285 aa20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 AGO3Q9H9G7 860 aaKnown RBP20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 METTL5Q9NRN9 209 aaKnown RBP20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 RASAL2Q9UJF2 1139 aa20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 THSD7BQ9C0I4 1608 aa20.12■□□□□ 0.81
ARHGEF28-205ENST00000503341 MEIS3P2A8K0S8 358 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms