RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ZNF268Q14587 947 aaPredicted RBP23.28■■□□□ 1.32
PTPN13-205ENST00000502971 DCUN1D2Q6PH85 259 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 FBXO46Q6PJ61 603 aaPredicted RBP23.28■■□□□ 1.32
PTPN13-205ENST00000502971 MRPL10Q7Z7H8 261 aaKnown RBP23.28■■□□□ 1.32
PTPN13-205ENST00000502971 RHOT1Q8IXI2 618 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 CCDC26Q8TAB7 109 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 FAM53CQ9NYF3 392 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 OGFRQ9NZT2 677 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 PADI3Q9ULW8 664 aa23.28■■□□□ 1.32
PTPN13-205ENST00000502971 RPL7AP62424 266 aaKnown RBP23.27■■□□□ 1.32
PTPN13-205ENST00000502971 MRPS25P82663 173 aaKnown RBP23.27■■□□□ 1.32
PTPN13-205ENST00000502971 CYP4A22Q5TCH4 519 aa23.27■■□□□ 1.32
PTPN13-205ENST00000502971 LHX8Q68G74 356 aa23.27■■□□□ 1.32
PTPN13-205ENST00000502971 LIMS2Q7Z4I7 341 aa23.27■■□□□ 1.32
PTPN13-205ENST00000502971 MAATS1Q7Z4T9 603 aa23.27■■□□□ 1.32
PTPN13-205ENST00000502971 OR6B3Q8NGW1 331 aa23.27■■□□□ 1.32
PTPN13-205ENST00000502971 MCEEQ96PE7 176 aa23.27■■□□□ 1.32
PTPN13-205ENST00000502971 CPXM1Q96SM3 734 aa23.27■■□□□ 1.32
PTPN13-205ENST00000502971 MIS12Q9H081 205 aa23.27■■□□□ 1.32
PTPN13-205ENST00000502971 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.27■■□□□ 1.32
PTPN13-205ENST00000502971 DDX47Q9H0S4 455 aaKnown RBP23.27■■□□□ 1.32
PTPN13-205ENST00000502971 SYNCQ9H7C4 482 aa23.27■■□□□ 1.32
PTPN13-205ENST00000502971 TRMT13Q9NUP7 481 aaKnown RBP23.27■■□□□ 1.32
PTPN13-205ENST00000502971 TSPAN16Q9UKR8 245 aa23.27■■□□□ 1.32
PTPN13-205ENST00000502971 SIGLEC16A6NMB1 481 aa23.26■■□□□ 1.31
PTPN13-205ENST00000502971 ZNF623O75123 536 aa23.26■■□□□ 1.31
PTPN13-205ENST00000502971 GJB6O95452 261 aa23.26■■□□□ 1.31
PTPN13-205ENST00000502971 GLI1P08151 1106 aa23.26■■□□□ 1.31
PTPN13-205ENST00000502971 FAM163BP0C2L3 166 aa23.26■■□□□ 1.31
PTPN13-205ENST00000502971 CD52P31358 61 aa23.26■■□□□ 1.31
PTPN13-205ENST00000502971 PSMC1P62191 440 aaKnown RBP23.26■■□□□ 1.31
PTPN13-205ENST00000502971 PIGHQ14442 188 aaPredicted RBP23.26■■□□□ 1.31
PTPN13-205ENST00000502971 AADACL2Q6P093 401 aa23.26■■□□□ 1.31
PTPN13-205ENST00000502971 DPH6Q7L8W6 267 aa23.26■■□□□ 1.31
PTPN13-205ENST00000502971 SLC13A5Q86YT5 568 aaPredicted RBP23.26■■□□□ 1.31
PTPN13-205ENST00000502971 SPTLC1O15269 473 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 GHRP10912 638 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 PDCLQ13371 301 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 DSC3Q14574 896 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 LPIN1Q14693 890 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 ACOT1Q86TX2 421 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 NIPA2Q8N8Q9 360 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 APPL2Q8NEU8 664 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 DDX27Q96GQ7 796 aaKnown RBP23.25■■□□□ 1.31
PTPN13-205ENST00000502971 GOLGA2P5Q9HBQ8 144 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 PAK6Q9NQU5 681 aaPredicted RBP23.25■■□□□ 1.31
PTPN13-205ENST00000502971 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.25■■□□□ 1.31
PTPN13-205ENST00000502971 MTUS1Q9ULD2 1270 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 A8MXQ7 604 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 MAP2K7O14733 419 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 ERBB2P04626 1255 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 SETSIPP0DME0 302 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 KRT3P12035 628 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 LILRA4P59901 499 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 GUCY2DQ02846 1103 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 ARHGAP17Q68EM7 881 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 XYLT1Q86Y38 959 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 TOP6BLQ8N6T0 577 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 UBA3Q8TBC4 463 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 IPO4Q8TEX9 1081 aaKnown RBP23.25■■□□□ 1.31
PTPN13-205ENST00000502971 ZFP42Q96MM3 310 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 EPB41L5Q9HCM4 733 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 NME7Q9Y5B8 376 aa23.25■■□□□ 1.31
PTPN13-205ENST00000502971 HUS1O60921 280 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 SASH3O75995 380 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 THP07101 528 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 GNL1P36915 607 aaPredicted RBP23.24■■□□□ 1.31
PTPN13-205ENST00000502971 MLH1P40692 756 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 GOLGA7BQ2TAP0 167 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 PPP1R26Q5T8A7 1209 aaPredicted RBP23.24■■□□□ 1.31
PTPN13-205ENST00000502971 LRRC38Q5VT99 294 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 KATNAL2Q8IYT4 538 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 CRYBG2Q8N1P7 616 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 C12orf29Q8N999 325 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 EIF1ADQ8N9N8 165 aaKnown RBP23.24■■□□□ 1.31
PTPN13-205ENST00000502971 SLC43A3Q8NBI5 491 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 GSTCDQ8NEC7 633 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 FNIP1Q8TF40 1166 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 AENQ8WTP8 325 aaKnown RBP23.24■■□□□ 1.31
PTPN13-205ENST00000502971 KBTBD7Q8WVZ9 684 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 MAIP1Q8WWC4 291 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 GAD1Q99259 594 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 SNX25Q9H3E2 840 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 NR2E1Q9Y466 385 aa23.24■■□□□ 1.31
PTPN13-205ENST00000502971 FSCN2O14926 492 aa23.23■■□□□ 1.31
PTPN13-205ENST00000502971 MYBL2P10244 700 aa23.23■■□□□ 1.31
PTPN13-205ENST00000502971 SKIP12755 728 aa23.23■■□□□ 1.31
PTPN13-205ENST00000502971 CHRNA3P32297 505 aa23.23■■□□□ 1.31
PTPN13-205ENST00000502971 TAS2R40P59535 323 aa23.23■■□□□ 1.31
PTPN13-205ENST00000502971 PKDCCQ504Y2 493 aa23.23■■□□□ 1.31
PTPN13-205ENST00000502971 MCRS1Q96EZ8 462 aa23.23■■□□□ 1.31
PTPN13-205ENST00000502971 TSPYL2Q9H2G4 693 aaPredicted RBP23.23■■□□□ 1.31
PTPN13-205ENST00000502971 AMACRQ9UHK6 382 aa23.23■■□□□ 1.31
PTPN13-205ENST00000502971 USTQ9Y2C2 406 aa23.23■■□□□ 1.31
PTPN13-205ENST00000502971 A0A0U1RQG5 324 aaPredicted RBP23.22■■□□□ 1.31
PTPN13-205ENST00000502971 MEIS3P2A8K0S8 358 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 BHMG1C9JSJ3 638 aaPredicted RBP23.22■■□□□ 1.31
PTPN13-205ENST00000502971 GOLGA8SH3BPF8 625 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 PHF2O75151 1096 aa23.22■■□□□ 1.31
PTPN13-205ENST00000502971 PFKMP08237 780 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms