RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SLC5A5Q92911 643 aa17.97■□□□□ 0.47
HMGXB3-201ENST00000502717 RMDN3Q96TC7 470 aa17.97■□□□□ 0.47
HMGXB3-201ENST00000502717 FBXO40Q9UH90 709 aa17.97■□□□□ 0.47
HMGXB3-201ENST00000502717 COL5A2P05997 1499 aaPredicted RBP17.97■□□□□ 0.47
HMGXB3-201ENST00000502717 DEAF1O75398 565 aaPredicted RBP17.97■□□□□ 0.47
HMGXB3-201ENST00000502717 BGNP21810 368 aa17.97■□□□□ 0.47
HMGXB3-201ENST00000502717 CDK16Q00536 496 aa17.97■□□□□ 0.47
HMGXB3-201ENST00000502717 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.97■□□□□ 0.47
HMGXB3-201ENST00000502717 ART4Q93070 314 aa17.97■□□□□ 0.47
HMGXB3-201ENST00000502717 LZTS1Q9Y250 596 aa17.97■□□□□ 0.47
HMGXB3-201ENST00000502717 ARHGEF37A1IGU5 675 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 SERPINB8P50452 374 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 GPC3P51654 580 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 ACTR2P61160 394 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 DUOXA2Q1HG44 320 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 SLC10A5Q5PT55 438 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 SYCP2LQ5T4T6 812 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 APTXQ7Z2E3 356 aaKnown RBP17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 GID8Q9NWU2 228 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 SEPT3Q9UH03 358 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 TSC22D4Q9Y3Q8 395 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 NEMP1O14524 444 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 DNALI1O14645 258 aaPredicted RBP17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 ATP5BP06576 529 aaKnown RBP17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 PSMC3P17980 439 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 MUTP22033 750 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 SERPINB10P48595 397 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 BNIP1Q12981 228 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 MTM1Q13496 603 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 PKN2Q16513 984 aaKnown RBP17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 TCP10LQ8TDR4 215 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 APBB2Q92870 758 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 ZFRQ96KR1 1074 aaKnown RBP17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 POLR3FQ9H1D9 316 aaPredicted RBP17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 RIOX1Q9H6W3 641 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 SOX13Q9UN79 622 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 AURKCQ9UQB9 309 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 ADGRA3Q8IWK6 1321 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 AKAP10O43572 662 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 ENTPD5O75356 428 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 RASGEF1CQ8N431 466 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 LRRC4Q9HBW1 653 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 GABBR1Q9UBS5 961 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 HERC5Q9UII4 1024 aaKnown RBP17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 DAGLAQ9Y4D2 1042 aa17.96■□□□□ 0.47
HMGXB3-201ENST00000502717 NCANO14594 1321 aa17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 MSH4O15457 936 aa17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 HLA-DRAP01903 254 aa17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 THRAP10827 490 aa17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 MROH9Q5TGP6 573 aa17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 SLC26A11Q86WA9 606 aa17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 MTRQ99707 1265 aa17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 TTYH3Q9C0H2 523 aa17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 C20orf96Q9NUD7 363 aaPredicted RBP17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 AP4S1Q9Y587 144 aa17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 COMMD3-BMI1R4GMX3 469 aa17.96■□□□□ 0.46
HMGXB3-201ENST00000502717 ZNF189O75820 626 aaPredicted RBP17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 SRGAP2CP0DJJ0 459 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 FLT3P36888 993 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 RGS2P41220 211 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 IGBP1P78318 339 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 CCDC15Q0P6D6 951 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 ZNF268Q14587 947 aaPredicted RBP17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 FAM71DQ8N9W8 422 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 RIT2Q99578 217 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 VPS33BQ9H267 617 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 ALADP13716 330 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 MAPK6Q16659 721 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 TFDP3Q5H9I0 405 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 ZNF720Q7Z2F6 126 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 CLEC10AQ8IUN9 316 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 NR1H4Q96RI1 486 aaPredicted RBP17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 GORASP1Q9BQQ3 440 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 BTBD7Q9P203 1132 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 KCNH4Q9UQ05 1017 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 TTC39CQ8N584 583 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 FAM81AQ8TBF8 368 aa17.95■□□□□ 0.46
HMGXB3-201ENST00000502717 C5orf60A6NFR6 353 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 RRM1P23921 792 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 SESN2P58004 480 aaPredicted RBP17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 PRELID2Q8N945 189 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 GOLGA8CPA6NN73 597 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 C16orf96A6NNT2 1141 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 CCDC90BQ9GZT6 254 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 HACL1Q9UJ83 578 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 NUDT2P50583 147 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 NEK2P51955 445 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 GPR141Q7Z602 305 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 ATP6V1E2Q96A05 226 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 MTMR9Q96QG7 549 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 NUDT12Q9BQG2 462 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 LRMDAQ9H2I8 198 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 PCDH9Q9HC56 1237 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 PCDHA10Q9Y5I2 948 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 KNDC1Q76NI1 1749 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 PDK4Q16654 411 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 ARL13BQ3SXY8 428 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 ZCCHC9Q8N567 271 aaKnown RBP17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 KRT35Q92764 455 aa17.94■□□□□ 0.46
HMGXB3-201ENST00000502717 CEP19Q96LK0 163 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms