RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CLTAP09496 248 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 TYMPP19971 482 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 MUTP22033 750 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 LRPAP1P30533 357 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 TUFMP49411 452 aaKnown RBP9.88□□□□□ -0.83
CCDC171-209ENST00000498725 GPR15P49685 360 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 NLRP12P59046 1061 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 LILRA4P59901 499 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 AMPD2Q01433 879 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 USP39Q53GS9 565 aaKnown RBP9.88□□□□□ -0.83
CCDC171-209ENST00000498725 C2orf27AQ580R0 203 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 PMS2CLQ68D20 193 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 JADE1Q6IE81 842 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 ANO7Q6IWH7 933 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 RINT1Q6NUQ1 792 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 SYT13Q7L8C5 426 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 KCNK18Q7Z418 384 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 CPA6Q8N4T0 437 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 CCDC33Q8N5R6 958 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 EZH1Q92800 747 aaPredicted RBP9.88□□□□□ -0.83
CCDC171-209ENST00000498725 CD101Q93033 1021 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 GTF3C6Q969F1 213 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 PLIN2Q99541 437 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 FSCN3Q9NQT6 498 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 DUS2Q9NX74 493 aaKnown RBP9.88□□□□□ -0.83
CCDC171-209ENST00000498725 WNT6Q9Y6F9 365 aa9.88□□□□□ -0.83
CCDC171-209ENST00000498725 NPHP3-ACAD11A0A0J9YXS1 232 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 XPOTO43592 962 aaKnown RBP9.87□□□□□ -0.83
CCDC171-209ENST00000498725 ZIC2O95409 532 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-209ENST00000498725 F11P03951 625 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 CSRP1P21291 193 aaKnown RBP9.87□□□□□ -0.83
CCDC171-209ENST00000498725 IFNAR2P48551 515 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 AARSP49588 968 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC171-209ENST00000498725 SIM1P81133 766 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-209ENST00000498725 MCL1Q07820 350 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 ANKRD1Q15327 319 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 ZBTB6Q15916 424 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 ENOX2Q16206 610 aaKnown RBP9.87□□□□□ -0.83
CCDC171-209ENST00000498725 TRIM61Q5EBN2 209 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 C1orf186Q6ZWK4 172 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 TMEM150AQ86TG1 271 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 LRRTM3Q86VH5 581 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 METTL23Q86XA0 190 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 TMEM161BQ8NDZ6 487 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 RLN3Q8WXF3 142 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 MRPS31Q92665 395 aaKnown RBP9.87□□□□□ -0.83
CCDC171-209ENST00000498725 ACDQ96AP0 544 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 CYP2S1Q96SQ9 504 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 PYM1Q9BRP8 204 aaKnown RBP9.87□□□□□ -0.83
CCDC171-209ENST00000498725 PI4K2AQ9BTU6 479 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 ZCWPW1Q9H0M4 648 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 ECT2Q9H8V3 914 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 RPF1Q9H9Y2 349 aaKnown RBP9.87□□□□□ -0.83
CCDC171-209ENST00000498725 PLEKHA5Q9HAU0 1116 aa9.87□□□□□ -0.83
CCDC171-209ENST00000498725 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
CCDC171-209ENST00000498725 ASPMQ8IZT6 3477 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 CYB561D2O14569 222 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 PRPF40AO75400 957 aaKnown RBP9.86□□□□□ -0.83
CCDC171-209ENST00000498725 NFICP08651 508 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 MAPTP10636 758 aaKnown RBP9.86□□□□□ -0.83
CCDC171-209ENST00000498725 HAPLN1P10915 354 aaPredicted RBP9.86□□□□□ -0.83
CCDC171-209ENST00000498725 IGF2RP11717 2491 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 CYP3A5P20815 502 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 WEE1P30291 646 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 LIG4P49917 911 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 SMTNP53814 917 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 MTF1Q14872 753 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 PDGFRLQ15198 375 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 FBXO43Q4G163 708 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 C9orf57Q5W0N0 161 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 KRT79Q5XKE5 535 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 TMEFF1Q8IYR6 380 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 THEM5Q8N1Q8 247 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 CHCHD4Q8N4Q1 142 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 DEFB119Q8N690 84 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 FRMD1Q8N878 549 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 EXOC4Q96A65 974 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 C8orf76Q96K31 380 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 GTPBP2Q9BX10 602 aaKnown RBP9.86□□□□□ -0.83
CCDC171-209ENST00000498725 NUSAP1Q9BXS6 441 aaKnown RBP9.86□□□□□ -0.83
CCDC171-209ENST00000498725 SLC32A1Q9H598 525 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 KIF9Q9HAQ2 790 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 EBF1Q9UH73 591 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 TBX20Q9UMR3 447 aa9.86□□□□□ -0.83
CCDC171-209ENST00000498725 ASCC3Q8N3C0 2202 aaKnown RBP9.86□□□□□ -0.83
CCDC171-209ENST00000498725 OGTO15294 1046 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 CFIP05156 583 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 CKMP06732 381 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 PLS3P13797 630 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 HMGA1P17096 107 aaKnown RBP9.85□□□□□ -0.83
CCDC171-209ENST00000498725 ENGP17813 658 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 DHX8Q14562 1220 aaKnown RBP9.85□□□□□ -0.83
CCDC171-209ENST00000498725 TMEM132DQ14C87 1099 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 DDR2Q16832 855 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 ZC2HC1CQ53FD0 456 aaPredicted RBP9.85□□□□□ -0.83
CCDC171-209ENST00000498725 SPATA1Q5VX52 437 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 WSCD1Q658N2 575 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 ZPBP2Q6X784 338 aa9.85□□□□□ -0.83
CCDC171-209ENST00000498725 MON1AQ86VX9 555 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms