RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 ACOT1Q86TX2 421 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 TMEM173Q86WV6 379 aaPredicted RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 GLYCTKQ8IVS8 523 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 SLC30A5Q8TAD4 765 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 LNX1Q8TBB1 728 aaPredicted RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 ZNF606Q8WXB4 792 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 TFAP2BQ92481 460 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 CLP1Q92989 425 aaKnown RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 EIF3CQ99613 913 aaKnown RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCG5-209ENST00000498607 GPR62Q9BZJ7 368 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 SPTLC3Q9NUV7 552 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 DDX43Q9NXZ2 648 aaKnown RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 PUF60Q9UHX1 559 aaKnown RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 PYCARDQ9ULZ3 195 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 NENFQ9UMX5 172 aa12.4□□□□□ -0.42
SCG5-209ENST00000498607 TIMM13Q9Y5L4 95 aaPredicted RBP12.4□□□□□ -0.42
SCG5-209ENST00000498607 H0YGN5 161 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 O00370 1275 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 HCRTO43612 131 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 OAZ2O95190 189 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 EFEMP2O95967 443 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 PDGFRBP09619 1106 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 LINC00271P0C7V0 271 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 LMO2P25791 158 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 YWHAHQ04917 246 aaPredicted RBP12.39□□□□□ -0.43
SCG5-209ENST00000498607 SPA17Q15506 151 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 CNGA2Q16280 664 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 FAM171A1Q5VUB5 890 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 ARHGAP17Q68EM7 881 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 TOGARAM2Q6ZUX3 1019 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 RNF168Q8IYW5 571 aaPredicted RBP12.39□□□□□ -0.43
SCG5-209ENST00000498607 THEM5Q8N1Q8 247 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 B3GALNT2Q8NCR0 500 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 TMEM169Q96HH4 297 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 RTP3Q9BQQ7 232 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 SYT15Q9BQS2 421 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 ZSWIM1Q9BR11 485 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 FAM117AQ9C073 453 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 UBE2OQ9C0C9 1292 aaKnown RBP12.39□□□□□ -0.43
SCG5-209ENST00000498607 SEPT11Q9NVA2 429 aaKnown RBP12.39□□□□□ -0.43
SCG5-209ENST00000498607 ADAMTS1Q9UHI8 967 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 CDH9Q9ULB4 789 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 PCDHGC3Q9UN70 934 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 PCDHB12Q9Y5F1 795 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 ADGRG1Q9Y653 693 aa12.39□□□□□ -0.43
SCG5-209ENST00000498607 ZNF263O14978 683 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 LSM8O95777 96 aaKnown RBP12.38□□□□□ -0.43
SCG5-209ENST00000498607 PTPN1P18031 435 aaKnown RBP12.38□□□□□ -0.43
SCG5-209ENST00000498607 PSMC1P62191 440 aaKnown RBP12.38□□□□□ -0.43
SCG5-209ENST00000498607 KRT83P78385 493 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 TSPY1Q01534 308 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 GFPT1Q06210 699 aaPredicted RBP12.38□□□□□ -0.43
SCG5-209ENST00000498607 CLEC16AQ2KHT3 1053 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 VARS2Q5ST30 1063 aaKnown RBP12.38□□□□□ -0.43
SCG5-209ENST00000498607 ZNF280DQ6N043 979 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 ALKBH5Q6P6C2 394 aaKnown RBP12.38□□□□□ -0.43
SCG5-209ENST00000498607 LCLAT1Q6UWP7 414 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 ACRBPQ8NEB7 543 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 PCDHB18PQ96TA0 734 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 ACBD6Q9BR61 282 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 DESI2Q9BSY9 194 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 TTPALQ9BTX7 342 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 HERC2P3Q9BVR0 1158 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 VN1R3Q9BXE9 311 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 PDCL3Q9H2J4 239 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 DPEP3Q9H4B8 488 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 LUC7LQ9NQ29 371 aaKnown RBP12.38□□□□□ -0.43
SCG5-209ENST00000498607 STK39Q9UEW8 545 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 NAGPAQ9UK23 515 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCG5-209ENST00000498607 RWDD3Q9Y3V2 267 aa12.38□□□□□ -0.43
SCG5-209ENST00000498607 ATP8B3O60423 1300 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 PTPRDP23468 1912 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 LCHNA4D1U4 455 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 OR6C75A6NL08 312 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 H7C4K7 107 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 ATP2C2O75185 946 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 MICAL2O94851 1124 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 CYP1A1P04798 512 aaPredicted RBP12.37□□□□□ -0.43
SCG5-209ENST00000498607 CCDC175P0C221 793 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 GZMAP12544 262 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 ACAT1P24752 427 aaKnown RBP12.37□□□□□ -0.43
SCG5-209ENST00000498607 CDH5P33151 784 aaPredicted RBP12.37□□□□□ -0.43
SCG5-209ENST00000498607 RGS19P49795 217 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 NOMO3P69849 1222 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 CYP27A1Q02318 531 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 MRPL58Q14197 206 aaKnown RBP12.37□□□□□ -0.43
SCG5-209ENST00000498607 USP41Q3LFD5 358 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 CTXN3Q4LDR2 81 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 INTS6LQ5JSJ4 861 aaKnown RBP12.37□□□□□ -0.43
SCG5-209ENST00000498607 C10orf76Q5T2E6 689 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 KIAA0319Q5VV43 1072 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 PPP1R2P3Q6NXS1 205 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 ANKS3Q6ZW76 656 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 DDX53Q86TM3 631 aaKnown RBP12.37□□□□□ -0.43
SCG5-209ENST00000498607 ZSCAN30Q86W11 494 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
SCG5-209ENST00000498607 PALB2Q86YC2 1186 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms