RNA–Protein interactions for RNA: ENST00000498328.1

USP33-210, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-210ENST00000498328 HSPA6P17066 643 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 CD6P30203 668 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 HTR6P50406 440 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 TERF1P54274 439 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 GHRHRQ02643 423 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 SQSTM1Q13501 440 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 RBMS2Q15434 407 aaKnown RBP3.16□□□□□ -1.9
USP33-210ENST00000498328 MTERF4Q7Z6M4 381 aaKnown RBP3.16□□□□□ -1.9
USP33-210ENST00000498328 HOMER1Q86YM7 354 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 C8orf58Q8NAV2 365 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 SLC17A8Q8NDX2 589 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 SH3TC2Q8TF17 1288 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 HOXB13Q92826 284 aaPredicted RBP3.16□□□□□ -1.9
USP33-210ENST00000498328 FAM136AQ96C01 138 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 REPS1Q96D71 796 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 C8orf37Q96NL8 207 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 TRMOQ9BU70 441 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 SIK2Q9H0K1 926 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 OSBPL2Q9H1P3 480 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 TOPORSQ9NS56 1045 aaPredicted RBP3.16□□□□□ -1.9
USP33-210ENST00000498328 SAP30BPQ9UHR5 308 aaKnown RBP3.16□□□□□ -1.9
USP33-210ENST00000498328 CCNL1Q9UK58 526 aaPredicted RBP3.16□□□□□ -1.9
USP33-210ENST00000498328 PCNTO95613 3336 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 CEP162Q5TB80 1403 aa3.16□□□□□ -1.9
USP33-210ENST00000498328 ARID4BQ4LE39 1312 aaPredicted RBP3.16□□□□□ -1.9
USP33-210ENST00000498328 SMARCA4P51532 1647 aa3.15□□□□□ -1.9
USP33-210ENST00000498328 NHSL1Q5SYE7 1610 aa3.15□□□□□ -1.9
USP33-210ENST00000498328 DHX57Q6P158 1386 aaKnown RBP3.15□□□□□ -1.9
USP33-210ENST00000498328 LACTBL1A8MY62 500 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 POC1B-GALNT4F8VUJ3 575 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 NEMP1O14524 444 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 TLR5O60602 858 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 CDC25AP30304 524 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 HNRNPMP52272 730 aaKnown RBP eCLIP3.15□□□□□ -1.91
USP33-210ENST00000498328 PDCD1Q15116 288 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 PCBP1Q15365 356 aaKnown RBP eCLIP3.15□□□□□ -1.91
USP33-210ENST00000498328 DAB2IPQ5VWQ8 1189 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 SERPINA13PQ6UXR4 307 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 GSG1LQ6UXU4 331 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 NAPRTQ6XQN6 538 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 C9orf47Q6ZRZ4 202 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 ZNF365Q70YC5 407 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 MIGA2Q7L4E1 593 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 CHSY1Q86X52 802 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 RHOT1Q8IXI2 618 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 NIM1KQ8IY84 436 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 GALNT4Q8N4A0 578 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 LRRC71Q8N4P6 559 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 DNAJC5GQ8N7S2 189 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.15□□□□□ -1.91
USP33-210ENST00000498328 KLHDC4Q8TBB5 520 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 NINJ1Q92982 152 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 VCPIP1Q96JH7 1222 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 KLHL32Q96NJ5 620 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 PNNQ9H307 717 aaKnown RBP3.15□□□□□ -1.91
USP33-210ENST00000498328 TDP1Q9NUW8 608 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 TFCP2L1Q9NZI6 479 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 KLHL13Q9P2N7 655 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 SCOCQ9UIL1 159 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 SCRIBQ14160 1630 aa3.15□□□□□ -1.91
USP33-210ENST00000498328 H0YIZ8 118 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 ADAMTS3O15072 1205 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 ABLIM3O94929 683 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 ATP5F1P24539 256 aaPredicted RBP3.14□□□□□ -1.91
USP33-210ENST00000498328 CDKN2AP42771 156 aaKnown RBP3.14□□□□□ -1.91
USP33-210ENST00000498328 KCNJ4P48050 445 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 PDE1AP54750 535 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 HTRA4P83105 476 aaPredicted RBP3.14□□□□□ -1.91
USP33-210ENST00000498328 RHDQ02161 417 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 PPP3CAQ08209 521 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 BMS1Q14692 1282 aaKnown RBP3.14□□□□□ -1.91
USP33-210ENST00000498328 SF3A1Q15459 793 aaKnown RBP3.14□□□□□ -1.91
USP33-210ENST00000498328 SMAP1Q8IYB5 467 aaPredicted RBP3.14□□□□□ -1.91
USP33-210ENST00000498328 IPO4Q8TEX9 1081 aaKnown RBP3.14□□□□□ -1.91
USP33-210ENST00000498328 TGFBRAP1Q8WUH2 860 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 TMX3Q96JJ7 454 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 PRDM4Q9UKN5 801 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 ISY1Q9ULR0 285 aaKnown RBP3.14□□□□□ -1.91
USP33-210ENST00000498328 SH2B3Q9UQQ2 575 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 MAPKBP1O60336 1514 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 CACNA1GO43497 2377 aa3.14□□□□□ -1.91
USP33-210ENST00000498328 EIF4G3O43432 1585 aaKnown RBP3.13□□□□□ -1.91
USP33-210ENST00000498328 RGS12O14924 1447 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 CUL9Q8IWT3 2517 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 H7C1Q1 480 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 TOM1O60784 492 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 GNAI3P08754 354 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 NHLRC4P0CG21 123 aaPredicted RBP3.13□□□□□ -1.91
USP33-210ENST00000498328 TNNT2P45379 298 aaPredicted RBP3.13□□□□□ -1.91
USP33-210ENST00000498328 GNAI1P63096 354 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 TBC1D25Q3MII6 688 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 TOR2AQ5JU69 321 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 RBM20Q5T481 1227 aaKnown RBP3.13□□□□□ -1.91
USP33-210ENST00000498328 TAF3Q5VWG9 929 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 ATG9BQ674R7 924 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 SLC30A10Q6XR72 485 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 GADL1Q6ZQY3 521 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 CYP2W1Q8TAV3 490 aa3.13□□□□□ -1.91
USP33-210ENST00000498328 LEO1Q8WVC0 666 aaPredicted RBP3.13□□□□□ -1.91
USP33-210ENST00000498328 ANP32BQ92688 251 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms