RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 NCANO14594 1321 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 NUP210Q8TEM1 1887 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 F5P12259 2224 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 SLC38A8A6NNN8 435 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 PRPF40AO75400 957 aaKnown RBP12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 CSH1P0DML2 217 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 CSH2P0DML3 217 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 PDIA4P13667 645 aaKnown RBP12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 DDX6P26196 483 aaKnown RBP eCLIP12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 WNT7BP56706 349 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 RPL10AP62906 217 aaKnown RBP12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 CYP4F8P98187 520 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 MYO1EQ12965 1108 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 SURF1Q15526 300 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 TSSK4Q6SA08 328 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 ERMP1Q7Z2K6 904 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 RALGPS2Q86X27 583 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 CELF5Q8N6W0 485 aaKnown RBP12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 IQUBQ8NA54 791 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 SPATA18Q8TC71 538 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 LEO1Q8WVC0 666 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 NELL1Q92832 810 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 PI4K2AQ9BTU6 479 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 MKNK1Q9BUB5 465 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 FGFBP2Q9BYJ0 223 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 IL21Q9HBE4 155 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 KIAA1586Q9HCI6 787 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 PDE11AQ9HCR9 933 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 ABCB6Q9NP58 842 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 TFIP11Q9UBB9 837 aaKnown RBP12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 L1RE1Q9UN81 338 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 SNX9Q9Y5X1 595 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 COL4A2P08572 1712 aa12.64□□□□□ -0.39
NUDCD3-211ENST00000497978 MYBPHLA2RUH7 354 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 ZNF233A6NK53 670 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 SPECC1L-ADORA2AF8WAN1 911 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 EIF3DO15371 548 aaKnown RBP eCLIP12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 CUTAO60888 179 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 LILRB5O75023 590 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 YEATS4O95619 227 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 TNNC2P02585 160 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 HSP90AA1P07900 732 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 CHRNB1P11230 501 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 PCSK1P29120 753 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 AVPR1AP37288 418 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 LHX1P48742 406 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 ASIC1P78348 528 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 INTS6LQ5JSJ4 861 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 DGKKQ5KSL6 1271 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 CMTM8Q8IZV2 173 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 TOP6BLQ8N6T0 577 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 GPR161Q8N6U8 529 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 MRPS31Q92665 395 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 DHX58Q96C10 678 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 ZFYVE19Q96K21 471 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 SLC46A2Q9BY10 475 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 MTMR12Q9C0I1 747 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 TMLHEQ9NVH6 421 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 KBTBD4Q9NVX7 518 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 GDAP2Q9NXN4 497 aa12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 UXTQ9UBK9 157 aaPredicted RBP12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 MAGED2Q9UNF1 606 aaPredicted RBP12.63□□□□□ -0.39
NUDCD3-211ENST00000497978 SOBPA7XYQ1 873 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 PRAMEF12O95522 483 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 ACAT1P24752 427 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 CTHP32929 405 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 CXCL12P48061 93 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 SOX9P48436 509 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 NLRP12P59046 1061 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 E2F4Q16254 413 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 DUOXA2Q1HG44 320 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 ITPRIPL2Q3MIP1 535 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 DPH6Q7L8W6 267 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 ADGRF2Q8IZF7 708 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 SPEM1Q8N4L4 309 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 DCLK2Q8N568 766 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 MAB21L3Q8N8X9 362 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 TTC8Q8TAM2 541 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 CXorf38Q8TB03 319 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 SNX21Q969T3 373 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 LRRC3BQ96PB8 259 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 TRIM9Q9C026 710 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 EPC1Q9H2F5 836 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 KIF9Q9HAQ2 790 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 MAGEF1Q9HAY2 307 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 INTS13Q9NVM9 706 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 GTSE1Q9NYZ3 720 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 HSPBP1Q9NZL4 362 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 RAB23Q9ULC3 237 aa12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 SMG5Q9UPR3 1016 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-211ENST00000497978 MYO15AQ9UKN7 3530 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 F11P03951 625 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 HMGA1P17096 107 aaKnown RBP12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 CYP2F1P24903 491 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 GPR15P49685 360 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 FAM26FQ5R3K3 315 aa12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 FOXD4L5Q5VV16 416 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 LMBRD2Q68DH5 695 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-211ENST00000497978 CC2D1AQ6P1N0 951 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms