RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 H0Y626 953 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 H3BS24 57 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 SLC7A4O43246 635 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 MTSS1O43312 755 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 HMMRO75330 724 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 KRT38O76015 456 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 F9P00740 461 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 PECAM1P16284 738 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-224ENST00000497488 BTF3P20290 206 aaKnown RBP6.69□□□□□ -1.34
BRCA1-224ENST00000497488 DDCP20711 480 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 AMPD1P23109 780 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 PSMA4P25789 261 aaKnown RBP6.69□□□□□ -1.34
BRCA1-224ENST00000497488 ATP5DP30049 168 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 MLLT6P55198 1093 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-224ENST00000497488 PPARDQ03181 441 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 NSUN2Q08J23 767 aaKnown RBP eCLIP6.69□□□□□ -1.34
BRCA1-224ENST00000497488 LRMPQ12912 555 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 EPS8Q12929 822 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 NFATC3Q12968 1075 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 NKPD1Q17RQ9 610 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 TMEM266Q2M3C6 531 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 C1orf141Q5JVX7 400 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 FYB2Q5VWT5 728 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 GPR139Q6DWJ6 353 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 OGFOD3Q6PK18 319 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 PAOXQ6QHF9 649 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 IL27RAQ6UWB1 636 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 LYPD4Q6UWN0 246 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 ABHD15Q6UXT9 468 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 RASGRP2Q7LDG7 609 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 SDCCAG8Q86SQ7 713 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-224ENST00000497488 DCP2Q8IU60 420 aaKnown RBP6.69□□□□□ -1.34
BRCA1-224ENST00000497488 CCDC28AQ8IWP9 274 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 ZFPM1Q8IX07 1006 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 OR8H3Q8N146 312 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 PQLC1Q8N2U9 271 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 MPP5Q8N3R9 675 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 GALNT4Q8N4A0 578 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 TTC39CQ8N584 583 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 SRBD1Q8N5C6 995 aaKnown RBP6.69□□□□□ -1.34
BRCA1-224ENST00000497488 KCTD6Q8NC69 237 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 ARRDC4Q8NCT1 418 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 CPT1CQ8TCG5 803 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 USP44Q9H0E7 712 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 AKTIPQ9H8T0 292 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 BRF2Q9HAW0 419 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 MKNK2Q9HBH9 465 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 ERVK-5Q9HDB9 667 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 SIDT1Q9NXL6 827 aaKnown RBP6.69□□□□□ -1.34
BRCA1-224ENST00000497488 WDR35Q9P2L0 1181 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 EPS15L1Q9UBC2 864 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 SEL1LQ9UBV2 794 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 PALD1Q9ULE6 856 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 CLCA2Q9UQC9 943 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 FLT1P17948 1338 aa6.69□□□□□ -1.34
BRCA1-224ENST00000497488 SYNJ2O15056 1496 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 A0A087WWL8 130 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 VWA3AA6NCI4 1184 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 GOLGA6L6A8MZA4 724 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 RTCAO00442 366 aaKnown RBP6.68□□□□□ -1.34
BRCA1-224ENST00000497488 FYB1O15117 783 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 VILLO15195 856 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 SGSM2O43147 1006 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 OIP5O43482 229 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 RASSF9O75901 435 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 NTSR2O95665 410 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 LTA4HP09960 611 aaKnown RBP6.68□□□□□ -1.34
BRCA1-224ENST00000497488 BMP3P12645 472 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 GLB1P16278 677 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 TACR1P25103 407 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 APEX1P27695 318 aaKnown RBP6.68□□□□□ -1.34
BRCA1-224ENST00000497488 PSMC2P35998 433 aaKnown RBP6.68□□□□□ -1.34
BRCA1-224ENST00000497488 SREBF1P36956 1147 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 MSH2P43246 934 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 MRE11P49959 708 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 PER3P56645 1201 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 CTXN1P60606 82 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 EGR3Q06889 387 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 STK4Q13043 487 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 MPP3Q13368 585 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 NFKBIBQ15653 356 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 TTC22Q5TAA0 569 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 KLHL24Q6TFL4 600 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 ATF7IPQ6VMQ6 1270 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 CATSPER4Q7RTX7 472 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 TMPRSS7Q7RTY8 843 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 UBE2Q1Q7Z7E8 422 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 LCA5Q86VQ0 697 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 EPHX4Q8IUS5 362 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 DNAJC5GQ8N7S2 189 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 SNX33Q8WV41 574 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 TBC1D5Q92609 795 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 C3orf49Q96BT1 292 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 APOPT1Q96IL0 206 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 MAP6Q96JE9 813 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 HHIPL1Q96JK4 782 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 HSPA12BQ96MM6 686 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 UBL7Q96S82 380 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-224ENST00000497488 ABCG4Q9H172 646 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 BCO1Q9HAY6 547 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms