RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 CHKAP35790 457 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ITGA8P53708 1063 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 GALCP54803 685 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ANTXR2P58335 489 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 FAM26FQ5R3K3 315 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ANKRD13BQ86YJ7 626 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 IFNLR1Q8IU57 520 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 IRF2BP1Q8IU81 584 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 RASGEF1CQ8N431 466 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 GRPEL2Q8TAA5 225 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 WNT8AQ9H1J5 351 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 CLK4Q9HAZ1 481 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 TBC1D14Q9P2M4 693 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 TEKT2Q9UIF3 430 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 PCDHGA3Q9Y5H0 932 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ZMYM2Q9UBW7 1377 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 PIK3C2BO00750 1634 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 MROH2AA6NES4 1674 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ANKRD34BA5PLL1 514 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 RBAK-RBAKDNI3L0D1 243 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 TM9SF1O15321 606 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 CALUO43852 315 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 TSPAN1O60635 241 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 SNX2O60749 519 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 TMCC2O75069 709 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 MAGEA4P43358 317 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ART3Q13508 389 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 LETM2Q2VYF4 491 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 IZUMO3Q5VZ72 239 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 BORAQ6PGQ7 559 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 PRR23CQ6ZRP0 262 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 TOM1L2Q6ZVM7 507 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ZNF410Q86VK4 478 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ELMOD2Q8IZ81 293 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 GSTCDQ8NEC7 633 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ST13P5Q8NFI4 369 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 LILRB4Q8NHJ6 448 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 SLC35G2Q8TBE7 412 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 RTFDC1Q9BY42 306 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 RAD21L1Q9H4I0 556 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 C8orf4Q9NR00 106 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ARHGAP26Q9UNA1 814 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 IFT52Q9Y366 437 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 MTSS1O43312 755 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 B3GALNT1O75752 331 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 PRKACAP17612 351 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 GUCY1A2P33402 732 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 SLC16A2P36021 539 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 E2F2Q14209 437 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 CTTNQ14247 550 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 HERC4Q5GLZ8 1057 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 NEK5Q6P3R8 708 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ADGRG6Q86SQ4 1221 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 NT5DC3Q86UY8 548 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ARID3BQ8IVW6 561 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 BLIDQ8IZY5 108 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 MCRS1Q96EZ8 462 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 CHID1Q9BWS9 393 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 WDR12Q9GZL7 423 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 UPF3AQ9H1J1 476 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 FBXO6Q9NRD1 293 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 PNPLA3Q9NST1 481 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 PPM1HQ9ULR3 514 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 SIK3Q9Y2K2 1263 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 SNX9Q9Y5X1 595 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 FLT1P17948 1338 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 SPATA31D1Q6ZQQ2 1576 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 PCDH11YQ9BZA8 1340 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 WASLO00401 505 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 SEC24DO94855 1032 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 RARBP10826 455 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ACTN1P12814 892 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 CREB1P16220 341 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 FOXN2P32314 431 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 KCNJ1P48048 391 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 THOP1P52888 689 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 DEFA1P59665 94 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 DEFA3P59666 94 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 GCKRQ14397 625 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 SFT2D3Q587I9 215 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ANKRD13DQ6ZTN6 518 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 ADCK1Q86TW2 530 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 KBTBD2Q8IY47 623 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 RBM15BQ8NDT2 890 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 WRNIP1Q96S55 665 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 LY9Q9HBG7 655 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 MRPL40Q9NQ50 206 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 NOX1Q9Y5S8 564 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 NR2E3Q9Y5X4 410 aa8.54□□□□□ -1.04
CRNKL1-205ENST00000496549 TMEM94Q12767 1356 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 RPTORQ8N122 1335 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 DNALI1O14645 258 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 OR52Z1P0C646 297 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 FCER1AP12319 257 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 TATP17735 454 aaPredicted RBP8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 IL32P24001 234 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 HNRNPFP52597 415 aaKnown RBP8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 LLGL1Q15334 1064 aa8.53□□□□□ -1.04
CRNKL1-205ENST00000496549 MOGQ16653 247 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms