RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 RPL7AP62424 266 aaKnown RBP17.34■□□□□ 0.37
HLA-A-208ENST00000496081 STILQ15468 1287 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 PPP1R15BQ5SWA1 713 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 PPP1R26Q5T8A7 1209 aaPredicted RBP17.34■□□□□ 0.37
HLA-A-208ENST00000496081 ZNF598Q86UK7 904 aaKnown RBP17.34■□□□□ 0.37
HLA-A-208ENST00000496081 ECHDC2Q86YB7 292 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 RNF208Q9H0X6 261 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 DPEP3Q9H4B8 488 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 PRDM10Q9NQV6 1147 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 RGS18Q9NS28 235 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 TMEM59LQ9UK28 342 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 OGDHLQ9ULD0 1010 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 STRIP2Q9ULQ0 834 aa17.34■□□□□ 0.37
HLA-A-208ENST00000496081 TTC7AQ9ULT0 858 aaPredicted RBP17.34■□□□□ 0.37
HLA-A-208ENST00000496081 LMO2P25791 158 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 SLC1A1P43005 524 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 ZNF211Q13398 564 aaPredicted RBP17.33■□□□□ 0.37
HLA-A-208ENST00000496081 GOLGA7BQ2TAP0 167 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 DNAJC24Q6P3W2 148 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 LRRC8DQ7L1W4 858 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 ADGRF2Q8IZF7 708 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 CRYBG2Q8N1P7 616 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 PDCL2Q8N4E4 241 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 TOP6BLQ8N6T0 577 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 C3orf20Q8ND61 904 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 C18orf8Q96DM3 657 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 LPIN3Q9BQK8 851 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 SNX25Q9H3E2 840 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 FAM49BQ9NUQ9 324 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 RAB21Q9UL25 225 aa17.33■□□□□ 0.37
HLA-A-208ENST00000496081 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.33■□□□□ 0.37
HLA-A-208ENST00000496081 PODXLO00592 558 aa17.33■□□□□ 0.36
HLA-A-208ENST00000496081 ERBB2P04626 1255 aa17.33■□□□□ 0.36
HLA-A-208ENST00000496081 PFKMP08237 780 aa17.33■□□□□ 0.36
HLA-A-208ENST00000496081 PDGFRBP09619 1106 aa17.33■□□□□ 0.36
HLA-A-208ENST00000496081 SELPP16109 830 aa17.33■□□□□ 0.36
HLA-A-208ENST00000496081 GABRB2P47870 512 aa17.33■□□□□ 0.36
HLA-A-208ENST00000496081 PDCLQ13371 301 aa17.33■□□□□ 0.36
HLA-A-208ENST00000496081 PKDCCQ504Y2 493 aa17.33■□□□□ 0.36
HLA-A-208ENST00000496081 RNPC3Q96LT9 517 aaKnown RBP17.33■□□□□ 0.36
HLA-A-208ENST00000496081 LRRC1Q9BTT6 524 aa17.33■□□□□ 0.36
HLA-A-208ENST00000496081 UBN1Q9NPG3 1134 aa17.33■□□□□ 0.36
HLA-A-208ENST00000496081 C9IYK1 514 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 CYB561D2O14569 222 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 POMCP01189 267 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 FGGP02679 453 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 WARSP23381 471 aaKnown RBP17.32■□□□□ 0.36
HLA-A-208ENST00000496081 RPL9P32969 192 aaKnown RBP17.32■□□□□ 0.36
HLA-A-208ENST00000496081 CLCN6P51797 869 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 GSCP56915 257 aaPredicted RBP17.32■□□□□ 0.36
HLA-A-208ENST00000496081 TAP1Q03518 808 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 ARHGAP17Q68EM7 881 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 AADACL2Q6P093 401 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 TTC30AQ86WT1 665 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 XYLT1Q86Y38 959 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 C3orf58Q8NDZ4 430 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 LINC01599Q8WXQ3 324 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 MCEEQ96PE7 176 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 PAAF1Q9BRP4 392 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 SYNCQ9H7C4 482 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 IP6K2Q9UHH9 426 aa17.32■□□□□ 0.36
HLA-A-208ENST00000496081 TDRD15B5MCY1 1934 aaKnown RBP17.32■□□□□ 0.36
HLA-A-208ENST00000496081 TARSL2A2RTX5 802 aaKnown RBP17.31■□□□□ 0.36
HLA-A-208ENST00000496081 CASTOR2A6NHX0 329 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 FAM163BP0C2L3 166 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 PSMC1P62191 440 aaKnown RBP17.31■□□□□ 0.36
HLA-A-208ENST00000496081 ZNF252P-AS1Q0IIN9 211 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 ZNF268Q14587 947 aaPredicted RBP17.31■□□□□ 0.36
HLA-A-208ENST00000496081 UPP1Q16831 310 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 DAB2IPQ5VWQ8 1189 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 DCUN1D2Q6PH85 259 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 SLC24A5Q71RS6 500 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 OSTM1Q86WC4 334 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.31■□□□□ 0.36
HLA-A-208ENST00000496081 SENP8Q96LD8 212 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 AP1M1Q9BXS5 423 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 ARGLU1Q9NWB6 273 aaPredicted RBP17.31■□□□□ 0.36
HLA-A-208ENST00000496081 WDR35Q9P2L0 1181 aa17.31■□□□□ 0.36
HLA-A-208ENST00000496081 SIGLEC16A6NMB1 481 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 GOLGA8SH3BPF8 625 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 PYGMP11217 842 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 MAN1A1P33908 653 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 RWDD2BP57060 319 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 OGDHQ02218 1023 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 GRIK3Q13003 919 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 BFSP2Q13515 415 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 WSCD1Q658N2 575 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 WDR93Q6P2C0 686 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 MCRS1Q96EZ8 462 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 INPP5FQ9Y2H2 1132 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 KRIT1O00522 736 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 GABRDO14764 452 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 INPPL1O15357 1258 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 EOMESO95936 686 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 KRT3P12035 628 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 VSNL1P62760 191 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 FAM189BP81408 668 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 MRPS25P82663 173 aaKnown RBP17.3■□□□□ 0.36
HLA-A-208ENST00000496081 GPNMBQ14956 572 aa17.3■□□□□ 0.36
HLA-A-208ENST00000496081 LONRF2Q1L5Z9 754 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms