RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TMEM130Q8N3G9 435 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 MAB21L3Q8N8X9 362 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 EZH1Q92800 747 aaPredicted RBP14.56□□□□□ -0.08
COL1A1-209ENST00000495677 CD101Q93033 1021 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 RUSC1Q9BVN2 902 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 ECT2Q9H8V3 914 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 ANKFY1Q9P2R3 1169 aa14.56□□□□□ -0.08
COL1A1-209ENST00000495677 DSPP15924 2871 aaKnown RBP14.56□□□□□ -0.08
COL1A1-209ENST00000495677 NBEAQ8NFP9 2946 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 ANO9A1A5B4 782 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 SFI1A8K8P3 1242 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 UPK3BL1B0FP48 263 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 UPK3BL2E5RIL1 263 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 FAM189A1O60320 539 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 ARSAP15289 507 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 GBP1P32455 592 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 DGKEP52429 567 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 TAF12Q16514 161 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 SLC39A12Q504Y0 691 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 TTC38Q5R3I4 469 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 MON1AQ86VX9 555 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 RIN3Q8TB24 985 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 SNX29Q8TEQ0 813 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 SEPT5Q99719 369 aaPredicted RBP14.55□□□□□ -0.08
COL1A1-209ENST00000495677 LHX6Q9UPM6 363 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 CACNA1EQ15878 2313 aa14.55□□□□□ -0.08
COL1A1-209ENST00000495677 PLXNB3Q9ULL4 1909 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 ANKRD11Q6UB99 2663 aaPredicted RBP14.54□□□□□ -0.08
COL1A1-209ENST00000495677 H0YCG3 227 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 TAF4O00268 1085 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 PPEF2O14830 753 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 OGTO15294 1046 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 JAK2O60674 1132 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 CSH1P0DML2 217 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 CSH2P0DML3 217 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 TCF3P15923 654 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 SCP2P22307 547 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 CDC25AP30304 524 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 TNFSF9P41273 254 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 FAM160A1Q05DH4 1040 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 LMAN2Q12907 356 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 ENOX2Q16206 610 aaKnown RBP14.54□□□□□ -0.08
COL1A1-209ENST00000495677 C9orf57Q5W0N0 161 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 LRRTM3Q86VH5 581 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 THEM5Q8N1Q8 247 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 CPA6Q8N4T0 437 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 GIPC2Q8TF65 315 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 OSCP1Q8WVF1 389 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 ZCCHC14Q8WYQ9 949 aaKnown RBP14.54□□□□□ -0.08
COL1A1-209ENST00000495677 CNOT6LQ96LI5 555 aaKnown RBP14.54□□□□□ -0.08
COL1A1-209ENST00000495677 CCSER1Q9C0I3 900 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 SLC32A1Q9H598 525 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 RPF1Q9H9Y2 349 aaKnown RBP14.54□□□□□ -0.08
COL1A1-209ENST00000495677 KCND2Q9NZV8 630 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 DERAQ9Y315 318 aa14.54□□□□□ -0.08
COL1A1-209ENST00000495677 PIGRP01833 764 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 CAPNS1P04632 268 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 GUCY2FP51841 1108 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 NCKAP1LP55160 1127 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 NR1H3Q13133 447 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 MTF1Q14872 753 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 SPDYCQ5MJ68 293 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 HYIQ5T013 277 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 KRT79Q5XKE5 535 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 TXNDC8Q6A555 127 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 CYP2U1Q7Z449 544 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 SYT2Q8N9I0 419 aaPredicted RBP14.53□□□□□ -0.08
COL1A1-209ENST00000495677 TSTD1Q8NFU3 115 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 OLIG1Q8TAK6 271 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 MRPS31Q92665 395 aaKnown RBP14.53□□□□□ -0.08
COL1A1-209ENST00000495677 ATP2A3Q93084 1043 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 MYRFLQ96LU7 910 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 TMEM206Q9H813 350 aa14.53□□□□□ -0.08
COL1A1-209ENST00000495677 LARSQ9P2J5 1176 aaKnown RBP14.53□□□□□ -0.08
COL1A1-209ENST00000495677 UXTQ9UBK9 157 aaPredicted RBP14.53□□□□□ -0.08
COL1A1-209ENST00000495677 PATE3B3GLJ2 98 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 H0Y626 953 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 LAD1O00515 517 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 TRIM16O95361 564 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 PRPHP41219 470 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 DPP6P42658 865 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 MATR3P43243 847 aaKnown RBP eCLIP14.52□□□□□ -0.09
COL1A1-209ENST00000495677 POU5F1Q01860 360 aaKnown RBP14.52□□□□□ -0.09
COL1A1-209ENST00000495677 ZNF77Q15935 545 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 EML3Q32P44 896 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 NAIF1Q69YI7 327 aaPredicted RBP14.52□□□□□ -0.09
COL1A1-209ENST00000495677 JADE1Q6IE81 842 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 SLC23A3Q6PIS1 610 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 KCNK18Q7Z418 384 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 PIP4P1Q86T03 277 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 METTL23Q86XA0 190 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 DCP1BQ8IZD4 617 aaKnown RBP14.52□□□□□ -0.09
COL1A1-209ENST00000495677 DEFB124Q8NES8 71 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 USP33Q8TEY7 942 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 TRMT2BQ96GJ1 504 aaKnown RBP14.52□□□□□ -0.09
COL1A1-209ENST00000495677 MMTAG2Q9BU76 263 aaKnown RBP14.52□□□□□ -0.09
COL1A1-209ENST00000495677 NUSAP1Q9BXS6 441 aaKnown RBP14.52□□□□□ -0.09
COL1A1-209ENST00000495677 ASB7Q9H672 318 aa14.52□□□□□ -0.09
COL1A1-209ENST00000495677 DUS2Q9NX74 493 aaKnown RBP14.52□□□□□ -0.09
COL1A1-209ENST00000495677 CPSF3Q9UKF6 684 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms