RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 USP37Q86T82 979 aa5.57□□□□□ -1.52
CCDC66-222ENST00000494672 FAM90A1Q86YD7 464 aa5.57□□□□□ -1.52
CCDC66-222ENST00000494672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.57□□□□□ -1.52
CCDC66-222ENST00000494672 CAMKK1Q8N5S9 505 aa5.57□□□□□ -1.52
CCDC66-222ENST00000494672 TNPO1Q92973 898 aaKnown RBP5.57□□□□□ -1.52
CCDC66-222ENST00000494672 FAM136AQ96C01 138 aa5.57□□□□□ -1.52
CCDC66-222ENST00000494672 C1orf43Q9BWL3 253 aa5.57□□□□□ -1.52
CCDC66-222ENST00000494672 RAI14Q9P0K7 980 aa5.57□□□□□ -1.52
CCDC66-222ENST00000494672 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.57□□□□□ -1.52
CCDC66-222ENST00000494672 GOLGA6CA6NDK9 693 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 GOLGA6BA6NDN3 693 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 CGB1A6NKQ9 187 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 SNUPNO95149 360 aaKnown RBP5.56□□□□□ -1.52
CCDC66-222ENST00000494672 KIF20AO95235 890 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 RHOP08100 348 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 FAM163BP0C2L3 166 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 GOLGA6DP0CG33 693 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 NDUFB7P17568 137 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 CD6P30203 668 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 HK3P52790 923 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 NOGQ13253 232 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 MTA1Q13330 715 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 TBCCQ15814 346 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 SRSF7Q16629 238 aaKnown RBP eCLIP5.56□□□□□ -1.52
CCDC66-222ENST00000494672 EPHA10Q5JZY3 1008 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 RBM20Q5T481 1227 aaKnown RBP5.56□□□□□ -1.52
CCDC66-222ENST00000494672 HEATR3Q7Z4Q2 680 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 SMC5Q8IY18 1101 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 SMAP1Q8IYB5 467 aaPredicted RBP5.56□□□□□ -1.52
CCDC66-222ENST00000494672 DPF1Q92782 380 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 EVI5LQ96CN4 794 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 NAF1Q96HR8 494 aaKnown RBP5.56□□□□□ -1.52
CCDC66-222ENST00000494672 PDCL3Q9H2J4 239 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 SERTAD4Q9NUC0 356 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 GEMIN8Q9NWZ8 242 aaKnown RBP5.56□□□□□ -1.52
CCDC66-222ENST00000494672 GOLGA6AQ9NYA3 693 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 RNF7Q9UBF6 113 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 ABCF2Q9UG63 623 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 ADAM21Q9UKJ8 722 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 AGAP1Q9UPQ3 857 aa5.56□□□□□ -1.52
CCDC66-222ENST00000494672 WIPF3A6NGB9 483 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 DHX16O60231 1041 aaKnown RBP5.55□□□□□ -1.52
CCDC66-222ENST00000494672 PEX14O75381 377 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 NXPH3O95157 252 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 EBLN1P0CF75 366 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 SCP2P22307 547 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 ALDH9A1P49189 494 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 MAP2K1Q02750 393 aaPredicted RBP5.55□□□□□ -1.52
CCDC66-222ENST00000494672 SLC20A2Q08357 652 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 TCF15Q12870 199 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 GRM1Q13255 1194 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 ZKSCAN8Q15776 578 aaPredicted RBP5.55□□□□□ -1.52
CCDC66-222ENST00000494672 TEDDM1Q5T9Z0 273 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 ZNF551Q7Z340 670 aaPredicted RBP5.55□□□□□ -1.52
CCDC66-222ENST00000494672 ANKRD23Q86SG2 305 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 GLCCI1Q86VQ1 547 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 PRR18Q8N4B5 295 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 CPA6Q8N4T0 437 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 SEMA6DQ8NFY4 1073 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 ATRIPQ8WXE1 791 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 RGMAQ96B86 450 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 FAM167AQ96KS9 214 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 PCGF6Q9BYE7 350 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 TINAGL1Q9GZM7 467 aaPredicted RBP5.55□□□□□ -1.52
CCDC66-222ENST00000494672 MRPL46Q9H2W6 279 aaKnown RBP5.55□□□□□ -1.52
CCDC66-222ENST00000494672 ARHGEF3Q9NR81 526 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 CACNA1IQ9P0X4 2223 aa5.55□□□□□ -1.52
CCDC66-222ENST00000494672 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 EPB41L2O43491 1005 aaKnown RBP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 CREB3O43889 395 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 SH3BP5O60239 455 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 FTLP02792 175 aaPredicted RBP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 HNRNPCP07910 306 aaKnown RBP eCLIP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 CELA2AP08217 269 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 CHRM3P20309 590 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 GCLCP48506 637 aaPredicted RBP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 ZNF81P51508 661 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 KRTAP10-11P60412 298 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 SLC10A2Q12908 348 aaPredicted RBP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 LLGL1Q15334 1064 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 EZH2Q15910 746 aaKnown RBP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 FAM160B1Q5W0V3 765 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 SFRP4Q6FHJ7 346 aaPredicted RBP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 CLEC4GQ6UXB4 293 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 USP45Q70EL2 814 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 DDB2Q92466 427 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 SMAD5Q99717 465 aaKnown RBP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 METTL14Q9HCE5 456 aaKnown RBP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 LMBRD1Q9NUN5 540 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 MRPS18AQ9NVS2 196 aaKnown RBP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 RBM28Q9NW13 759 aaKnown RBP5.54□□□□□ -1.52
CCDC66-222ENST00000494672 FLRT1Q9NZU1 646 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 DKK3Q9UBP4 350 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 PNMA2Q9UL42 364 aa5.54□□□□□ -1.52
CCDC66-222ENST00000494672 TARM1B6A8C7 271 aa5.53□□□□□ -1.52
CCDC66-222ENST00000494672 M0QYG6 137 aa5.53□□□□□ -1.52
CCDC66-222ENST00000494672 ZNF500O60304 480 aaPredicted RBP5.53□□□□□ -1.52
CCDC66-222ENST00000494672 MAP4K4O95819 1239 aaPredicted RBP5.53□□□□□ -1.52
CCDC66-222ENST00000494672 ZRSR2Q15696 482 aaKnown RBP5.53□□□□□ -1.52
CCDC66-222ENST00000494672 GET4Q7L5D6 327 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms