RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 SPATA18Q8TC71 538 aa23.94■■□□□ 1.42
CDKN2A-206ENST00000494262 CCDC127Q96BQ5 260 aa23.94■■□□□ 1.42
CDKN2A-206ENST00000494262 FNBP1Q96RU3 617 aa23.94■■□□□ 1.42
CDKN2A-206ENST00000494262 MKNK1Q9BUB5 465 aa23.94■■□□□ 1.42
CDKN2A-206ENST00000494262 TNNI1P19237 187 aa23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 TARSP26639 723 aaKnown RBP23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 CDC25CP30307 473 aa23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 GPR15P49685 360 aa23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 PSMD6Q15008 389 aa23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 KNOP1Q1ED39 458 aaKnown RBP23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 ASCL5Q7RTU5 278 aa23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 TRAPPC11Q7Z392 1133 aa23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 IL21Q9HBE4 155 aa23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 EXOC1Q9NV70 894 aa23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 CGNQ9P2M7 1197 aaKnown RBP23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 GTF3C4Q9UKN8 822 aa23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 MRPS17Q9Y2R5 130 aaKnown RBP23.93■■□□□ 1.42
CDKN2A-206ENST00000494262 HCRTO43612 131 aa23.92■■□□□ 1.42
CDKN2A-206ENST00000494262 KLRC4O43908 158 aa23.92■■□□□ 1.42
CDKN2A-206ENST00000494262 PCSK1P29120 753 aa23.92■■□□□ 1.42
CDKN2A-206ENST00000494262 NKD2Q969F2 451 aaPredicted RBP23.92■■□□□ 1.42
CDKN2A-206ENST00000494262 NELL2Q99435 816 aa23.92■■□□□ 1.42
CDKN2A-206ENST00000494262 PKMYT1Q99640 499 aa23.92■■□□□ 1.42
CDKN2A-206ENST00000494262 CGRRF1Q99675 332 aa23.92■■□□□ 1.42
CDKN2A-206ENST00000494262 TRPV5Q9NQA5 729 aa23.92■■□□□ 1.42
CDKN2A-206ENST00000494262 SPATA6Q9NWH7 488 aaPredicted RBP23.92■■□□□ 1.42
CDKN2A-206ENST00000494262 PRR23AA6NEV1 266 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 MAN2B1O00754 1011 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 DPYSL4O14531 572 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 GABRDO14764 452 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 CYP2F1P24903 491 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 CCDC142Q17RM4 750 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 SDHAF4Q5VUM1 108 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 DPH6Q7L8W6 267 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 C12orf56Q8IXR9 622 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 STKLD1Q8NE28 680 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 TASP1Q9H6P5 420 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 ABCB6Q9NP58 842 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 USP25Q9UHP3 1055 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 HPSEQ9Y251 543 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 PIAS3Q9Y6X2 628 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 F5P12259 2224 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 CACNA1IQ9P0X4 2223 aa23.91■■□□□ 1.42
CDKN2A-206ENST00000494262 TICRRQ7Z2Z1 1910 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 RIF1Q5UIP0 2472 aaKnown RBP23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 SHISA7A6NL88 538 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 NCAM2O15394 837 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 EXOC3O60645 756 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 PRAMEF12O95522 483 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 HMGA1P17096 107 aaKnown RBP23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 MAGEA9P43362 315 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 RPL10AP62906 217 aaKnown RBP23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 FCHO2Q0JRZ9 810 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 STK4Q13043 487 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 DDR2Q16832 855 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 KMT5BQ4FZB7 885 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 LIMS2Q7Z4I7 341 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 SPATA2LQ8IUW3 424 aaPredicted RBP23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 GOLGA5Q8TBA6 731 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 CSGALNACT1Q8TDX6 532 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 KBTBD7Q8WVZ9 684 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 CLDN23Q96B33 292 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 MMS19Q96T76 1030 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 NDRG2Q9UN36 371 aaKnown RBP23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 MAGED2Q9UNF1 606 aaPredicted RBP23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 COL4A2P08572 1712 aa23.9■■□□□ 1.42
CDKN2A-206ENST00000494262 MYBPHLA2RUH7 354 aa23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 ARNTLO00327 626 aa23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 CHADO15335 359 aa23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 CST3P01034 146 aaPredicted RBP23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 SP9P0CG40 484 aa23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 KIAA0895Q8NCT3 520 aa23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 LRRC3BQ96PB8 259 aa23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 SYT15Q9BQS2 421 aa23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 ATP6V1DQ9Y5K8 247 aa23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 R4GN57 208 aa23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 NUP210Q8TEM1 1887 aaPredicted RBP23.89■■□□□ 1.41
CDKN2A-206ENST00000494262 FRYLO94915 3013 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 LAMTOR5O43504 91 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 ATP2C2O75185 946 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 CSH1P0DML2 217 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 CSH2P0DML3 217 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 WARSP23381 471 aaKnown RBP23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 LMO2P25791 158 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 WEE1P30291 646 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 SYKP43405 635 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 NDUFA8P51970 172 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 NLRP12P59046 1061 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 PSMC1P62191 440 aaKnown RBP23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 PSMD2Q13200 908 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 TMEM150AQ86TG1 271 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 MAML2Q8IZL2 1156 aaPredicted RBP23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 FAM3CQ92520 227 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 SLC46A2Q9BY10 475 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 SMG9Q9H0W8 520 aaKnown RBP23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 GZF1Q9H116 711 aaPredicted RBP23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 OBP2AQ9NY56 170 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 CDH9Q9ULB4 789 aa23.88■■□□□ 1.41
CDKN2A-206ENST00000494262 PTPRZ1P23471 2315 aaPredicted RBP23.87■■□□□ 1.41
CDKN2A-206ENST00000494262 F11P03951 625 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms