RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 MAGEF1Q9HAY2 307 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 TRPV4Q9HBA0 871 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 LTB4R2Q9NPC1 389 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 GDAP2Q9NXN4 497 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 DDX43Q9NXZ2 648 aaKnown RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 GTF3C4Q9UKN8 822 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 ITGA11Q9UKX5 1188 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 NME7Q9Y5B8 376 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 TCHHQ07283 1943 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 MYBPHLA2RUH7 354 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 PROB1E7EW31 1015 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 ARNTLO00327 626 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 GABRDO14764 452 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 HUS1O60921 280 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 PRPF40AO75400 957 aaKnown RBP9.17□□□□□ -0.94
LRCH3-219ENST00000494069 PRAMEF12O95522 483 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 TNNC2P02585 160 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 SLFN14P0C7P3 912 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 DLATP10515 647 aaKnown RBP9.17□□□□□ -0.94
LRCH3-219ENST00000494069 PDIA4P13667 645 aaKnown RBP9.17□□□□□ -0.94
LRCH3-219ENST00000494069 HOXB1P14653 301 aaPredicted RBP9.17□□□□□ -0.94
LRCH3-219ENST00000494069 PFKFB1P16118 471 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 HMGA1P17096 107 aaKnown RBP9.17□□□□□ -0.94
LRCH3-219ENST00000494069 PSMC3P17980 439 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 CYP2F1P24903 491 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 LMO2P25791 158 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 CASP4P49662 377 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 EMP3P54852 163 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 STK4Q13043 487 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 SNRNP35Q16560 246 aaKnown RBP9.17□□□□□ -0.94
LRCH3-219ENST00000494069 DUOXA2Q1HG44 320 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 BMT2Q1RMZ1 405 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 KMT5BQ4FZB7 885 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 INTS6LQ5JSJ4 861 aaKnown RBP9.17□□□□□ -0.94
LRCH3-219ENST00000494069 GPR158Q5T848 1215 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 TRAPPC11Q7Z392 1133 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 TMEM150AQ86TG1 271 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 DCP1BQ8IZD4 617 aaKnown RBP9.17□□□□□ -0.94
LRCH3-219ENST00000494069 ADGRF2Q8IZF7 708 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 KIAA0895Q8NCT3 520 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 TTC8Q8TAM2 541 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 SPPL2BQ8TCT7 592 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 KBTBD7Q8WVZ9 684 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 ELMO3Q96BJ8 720 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 HPDLQ96IR7 371 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 SHDQ96IW2 340 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 ANKRD36BP1Q96IX9 119 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 ZFYVE19Q96K21 471 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 SPATA32Q96LK8 384 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 ACBD6Q9BR61 282 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 GDPD2Q9HCC8 539 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 PLSCR2Q9NRY7 297 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 HSFX1Q9UBD0 423 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 HPSEQ9Y251 543 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 ASB3Q9Y575 518 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 PCDHB5Q9Y5E4 795 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 R4GN57 208 aa9.17□□□□□ -0.94
LRCH3-219ENST00000494069 CACNA1IQ9P0X4 2223 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 PVALEFA0A1B0GWK0 134 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 ZNF263O14978 683 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 KIAA0391O15091 583 aaKnown RBP9.16□□□□□ -0.94
LRCH3-219ENST00000494069 F11P03951 625 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 PDGFRBP09619 1106 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 SP9P0CG40 484 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 CMA1P23946 247 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 SOX9P48436 509 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 NDUFA8P51970 172 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 PSMC1P62191 440 aaKnown RBP9.16□□□□□ -0.94
LRCH3-219ENST00000494069 TSPY1Q01534 308 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 CYP24A1Q07973 514 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 VEPH1Q14D04 833 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 PSMD6Q15008 389 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 KNOP1Q1ED39 458 aaKnown RBP9.16□□□□□ -0.94
LRCH3-219ENST00000494069 ZNF852Q6ZMS4 543 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 LIMS2Q7Z4I7 341 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 ITIH5Q86UX2 942 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 WDR49Q8IV35 697 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 C1orf210Q8IVY1 113 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 MFSD6LQ8IWD5 586 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 CEP57L1Q8IYX8 460 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 ZNF687Q8N1G0 1237 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 TOP6BLQ8N6T0 577 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 XXYLT1Q8NBI6 393 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 RIN3Q8TB24 985 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 C2orf15Q8WU43 125 aaKnown RBP9.16□□□□□ -0.94
LRCH3-219ENST00000494069 CGRRF1Q99675 332 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 MRPL45Q9BRJ2 306 aaKnown RBP9.16□□□□□ -0.94
LRCH3-219ENST00000494069 SLC46A2Q9BY10 475 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 GPR88Q9GZN0 384 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 SPATA6Q9NWH7 488 aaPredicted RBP9.16□□□□□ -0.94
LRCH3-219ENST00000494069 NDRG2Q9UN36 371 aaKnown RBP9.16□□□□□ -0.94
LRCH3-219ENST00000494069 MAGED2Q9UNF1 606 aaPredicted RBP9.16□□□□□ -0.94
LRCH3-219ENST00000494069 CFAP54Q96N23 3096 aa9.16□□□□□ -0.94
LRCH3-219ENST00000494069 F5P12259 2224 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 UBE4BO95155 1302 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 PRR23AA6NEV1 266 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 SLC38A8A6NNN8 435 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 TADA3O75528 432 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 TNNI1P19237 187 aa9.15□□□□□ -0.94
LRCH3-219ENST00000494069 CCNE1P24864 410 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms