RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 GABRR2P28476 465 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 PNPLA4P41247 253 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 MYL6P60660 151 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 DDR2Q16832 855 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 INTS6LQ5JSJ4 861 aaKnown RBP13.54□□□□□ -0.24
HSPG2-212ENST00000493940 PHLDB3Q6NSJ2 640 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 FAM171BQ6P995 826 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 KRBA2Q6ZNG9 492 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 ASCL5Q7RTU5 278 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 ARID3BQ8IVW6 561 aaPredicted RBP13.54□□□□□ -0.24
HSPG2-212ENST00000493940 CCDC105Q8IYK2 499 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 ZNF687Q8N1G0 1237 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 ELMOD1Q8N336 334 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 DTWD2Q8NBA8 298 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 PARD3BQ8TEW8 1205 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 SMARCD2Q92925 531 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 ACBD6Q9BR61 282 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 MRPL45Q9BRJ2 306 aaKnown RBP13.54□□□□□ -0.24
HSPG2-212ENST00000493940 SMG9Q9H0W8 520 aaKnown RBP13.54□□□□□ -0.24
HSPG2-212ENST00000493940 XYLT2Q9H1B5 865 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 TRPV4Q9HBA0 871 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 KIAA1586Q9HCI6 787 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 ZFP14Q9HCL3 533 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 TMEM30AQ9NV96 361 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 HSFX1Q9UBD0 423 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 MAPK8IP1Q9UQF2 711 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 FAM186AA6NE01 2351 aa13.54□□□□□ -0.24
HSPG2-212ENST00000493940 PTPRZ1P23471 2315 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-212ENST00000493940 A0A1W2PQ27 194 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 A0A1W2PQ64 194 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 A0A1W2PQD8 194 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 PRR23AA6NEV1 266 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 HEPACAM2A8MVW5 462 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 ARNTLO00327 626 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 PRAMEF12O95522 483 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 TNNC2P02585 160 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 F11P03951 625 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 C4BPAP04003 597 aaKnown RBP13.53□□□□□ -0.24
HSPG2-212ENST00000493940 PDGFRBP09619 1106 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 TNNI1P19237 187 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 PSMC1P62191 440 aaKnown RBP13.53□□□□□ -0.24
HSPG2-212ENST00000493940 PSMD2Q13200 908 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 PLD1Q13393 1074 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 MLF2Q15773 248 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-212ENST00000493940 WDR44Q5JSH3 913 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 ADGRF2Q8IZF7 708 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 MAML2Q8IZL2 1156 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-212ENST00000493940 TOP6BLQ8N6T0 577 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 PJA1Q8NG27 643 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 RIN3Q8TB24 985 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 SPPL2BQ8TCT7 592 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 ERCC4Q92889 916 aaPredicted RBP13.53□□□□□ -0.24
HSPG2-212ENST00000493940 SLC46A2Q9BY10 475 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 EXOC1Q9NV70 894 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 USP25Q9UHP3 1055 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 ASB3Q9Y575 518 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
HSPG2-212ENST00000493940 EXOC3O60645 756 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 PRPF40AO75400 957 aaKnown RBP13.52□□□□□ -0.25
HSPG2-212ENST00000493940 TADA3O75528 432 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 RHOBTB3O94955 611 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 TUFMP49411 452 aaKnown RBP13.52□□□□□ -0.25
HSPG2-212ENST00000493940 CACNA2D1P54289 1103 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 CDH8P55286 799 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 SNRPFP62306 86 aaKnown RBP13.52□□□□□ -0.25
HSPG2-212ENST00000493940 CLDN10P78369 228 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 SURF1Q15526 300 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 GPR158Q5T848 1215 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 TDRD10Q5VZ19 366 aaKnown RBP13.52□□□□□ -0.25
HSPG2-212ENST00000493940 HS2ST1Q7LGA3 356 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 DCP1BQ8IZD4 617 aaKnown RBP13.52□□□□□ -0.25
HSPG2-212ENST00000493940 FMR1NBQ8N0W7 255 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-212ENST00000493940 TMEM86AQ8N2M4 240 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 ENGASEQ8NFI3 743 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 ZFYVE19Q96K21 471 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 SCAND2PQ9GZW5 306 aaPredicted RBP13.52□□□□□ -0.25
HSPG2-212ENST00000493940 SDCBP2Q9H190 292 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 ATXN3LQ9H3M9 355 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 DPEP3Q9H4B8 488 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.25
HSPG2-212ENST00000493940 KANSL1LA0AUZ9 987 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 PDXKO00764 312 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 NR3C1P04150 777 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 PSMC3P17980 439 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 WARSP23381 471 aaKnown RBP13.51□□□□□ -0.25
HSPG2-212ENST00000493940 TARSP26639 723 aaKnown RBP13.51□□□□□ -0.25
HSPG2-212ENST00000493940 GDI1P31150 447 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 RAP1GAPP47736 663 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 NLRP12P59046 1061 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 PNOCQ13519 176 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 TPRG1Q6ZUI0 275 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 DPH6Q7L8W6 267 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 SLC9A9Q8IVB4 645 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 MFSD6LQ8IWD5 586 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 SMYD4Q8IYR2 804 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-212ENST00000493940 LEMD2Q8NC56 503 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 FAM200AQ8TCP9 573 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 C2orf15Q8WU43 125 aaKnown RBP13.51□□□□□ -0.25
HSPG2-212ENST00000493940 TMEM174Q8WUU8 243 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 FNBP1Q96RU3 617 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms