RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 GTF3C4Q9UKN8 822 aa24.22■■□□□ 1.47
SNIP1-203ENST00000493916 PDGFBP01127 241 aaPredicted RBP24.21■■□□□ 1.47
SNIP1-203ENST00000493916 LMO2P25791 158 aa24.21■■□□□ 1.47
SNIP1-203ENST00000493916 CDR1P51861 262 aa24.21■■□□□ 1.47
SNIP1-203ENST00000493916 ST13P5Q8NFI4 369 aaPredicted RBP24.21■■□□□ 1.47
SNIP1-203ENST00000493916 FAM200AQ8TCP9 573 aa24.21■■□□□ 1.47
SNIP1-203ENST00000493916 ELSPBP1Q96BH3 223 aa24.21■■□□□ 1.47
SNIP1-203ENST00000493916 MRPL45Q9BRJ2 306 aaKnown RBP24.21■■□□□ 1.47
SNIP1-203ENST00000493916 PI4K2AQ9BTU6 479 aa24.21■■□□□ 1.47
SNIP1-203ENST00000493916 GPR88Q9GZN0 384 aa24.21■■□□□ 1.47
SNIP1-203ENST00000493916 SNX25Q9H3E2 840 aa24.21■■□□□ 1.47
SNIP1-203ENST00000493916 ZNF334Q9HCZ1 680 aaPredicted RBP24.21■■□□□ 1.47
SNIP1-203ENST00000493916 FBXL21Q9UKT6 434 aa24.21■■□□□ 1.47
SNIP1-203ENST00000493916 A0A1W2PRU2 124 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 MYBPHLA2RUH7 354 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 KRT13P13646 458 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 FCARP24071 287 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 UBE2HP62256 183 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 TEAD2Q15562 447 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 MAPRE1Q15691 268 aaKnown RBP24.2■■□□□ 1.46
SNIP1-203ENST00000493916 CCDC142Q17RM4 750 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 FAM78AQ5JUQ0 283 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 C4orf50Q6ZRC1 276 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 SV2AQ7L0J3 742 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 SPATA2LQ8IUW3 424 aaPredicted RBP24.2■■□□□ 1.46
SNIP1-203ENST00000493916 ZC3H3Q8IXZ2 948 aaKnown RBP24.2■■□□□ 1.46
SNIP1-203ENST00000493916 ADSSL1Q8N142 457 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 ASB16Q96NS5 453 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 KXD1Q9BQD3 176 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 KCNH6Q9H252 994 aa24.2■■□□□ 1.46
SNIP1-203ENST00000493916 NXF1Q9UBU9 619 aaKnown RBP24.2■■□□□ 1.46
SNIP1-203ENST00000493916 CETN3O15182 167 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 CFHP08603 1231 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 GJA1P17302 382 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 CYP2F1P24903 491 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 GNL1P36915 607 aaPredicted RBP24.19■■□□□ 1.46
SNIP1-203ENST00000493916 MAGEA11P43364 429 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 PSMC1P62191 440 aaKnown RBP24.19■■□□□ 1.46
SNIP1-203ENST00000493916 RPL10AP62906 217 aaKnown RBP24.19■■□□□ 1.46
SNIP1-203ENST00000493916 SGSM1Q2NKQ1 1148 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 ZNF667Q5HYK9 610 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 GAREM2Q75VX8 874 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 TAF4BQ92750 862 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 SMARCD2Q92925 531 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 ZSWIM3Q96MP5 696 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 TSG101Q99816 390 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 TRPV4Q9HBA0 871 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 CRTAC1Q9NQ79 661 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 MAN1B1Q9UKM7 699 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 NME7Q9Y5B8 376 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 KMT2EQ8IZD2 1858 aa24.19■■□□□ 1.46
SNIP1-203ENST00000493916 ATP2C2O75185 946 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 PDGFRBP09619 1106 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 TRIM49P0CI25 452 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 TRIM49CP0CI26 452 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 PPP1R2P41236 205 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 LRRC63Q05C16 580 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 TANGO2Q6ICL3 276 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 SIX5Q8N196 739 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 OR6B3Q8NGW1 331 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 MYCBPAPQ8TBZ2 947 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 GPR152Q8TDT2 470 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 GIPC2Q8TF65 315 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 MYLPFQ96A32 169 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 SMYD3Q9H7B4 428 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 IL21Q9HBE4 155 aa24.18■■□□□ 1.46
SNIP1-203ENST00000493916 ZNF318Q5VUA4 2279 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 SLC16A3O15427 465 aaKnown RBP24.17■■□□□ 1.46
SNIP1-203ENST00000493916 ASS1P00966 412 aaKnown RBP24.17■■□□□ 1.46
SNIP1-203ENST00000493916 EPB41P11171 864 aaKnown RBP24.17■■□□□ 1.46
SNIP1-203ENST00000493916 P4HA1P13674 534 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 GABRR2P28476 465 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 CDC25CP30307 473 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 GTF2H1P32780 548 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 PIK3CAP42336 1068 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 GPR15P49685 360 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 GPC5P78333 572 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 STIM1Q13586 685 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 TAF12Q16514 161 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 ZSCAN18Q8TBC5 510 aaPredicted RBP24.17■■□□□ 1.46
SNIP1-203ENST00000493916 MFSD1Q9H3U5 465 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 ZFP14Q9HCL3 533 aa24.17■■□□□ 1.46
SNIP1-203ENST00000493916 PSMA7O14818 248 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 HLA-DRAP01903 254 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 CSH1P0DML2 217 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 CSH2P0DML3 217 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 HMGA1P17096 107 aaKnown RBP24.16■■□□□ 1.46
SNIP1-203ENST00000493916 GCLMP48507 274 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 PMS1P54277 932 aaKnown RBP24.16■■□□□ 1.46
SNIP1-203ENST00000493916 VCPP55072 806 aaKnown RBP24.16■■□□□ 1.46
SNIP1-203ENST00000493916 FKBP3Q00688 224 aaKnown RBP24.16■■□□□ 1.46
SNIP1-203ENST00000493916 PPP3CAQ08209 521 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 ANKRD40Q6AI12 368 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 DHTKD1Q96HY7 919 aaPredicted RBP24.16■■□□□ 1.46
SNIP1-203ENST00000493916 CEP295NLQ96MC4 621 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 GCNAQ96QF7 691 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 PLA2G2FQ9BZM2 168 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 ATXN3LQ9H3M9 355 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 SLITRK6Q9H5Y7 841 aa24.16■■□□□ 1.46
SNIP1-203ENST00000493916 TMEM8AQ9HCN3 771 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms