RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ZC3H11AO75152 810 aaKnown RBP eCLIP20.94■□□□□ 0.94
RNF40-203ENST00000493683 ARHGEF7Q14155 803 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 SMAD1Q15797 465 aaKnown RBP20.94■□□□□ 0.94
RNF40-203ENST00000493683 RIN2Q8WYP3 895 aaPredicted RBP20.94■□□□□ 0.94
RNF40-203ENST00000493683 PABPC5Q96DU9 382 aaKnown RBP20.94■□□□□ 0.94
RNF40-203ENST00000493683 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.94■□□□□ 0.942e-7■□□□□ 10.8
RNF40-203ENST00000493683 LZTS1Q9Y250 596 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 PDHBP11177 359 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 AGAP9Q5VTM2 703 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 TTC33Q6PID6 262 aaPredicted RBP20.94■□□□□ 0.94
RNF40-203ENST00000493683 RFWD2Q8NHY2 731 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 ZNF507Q8TCN5 953 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 USP13Q92995 863 aaPredicted RBP20.94■□□□□ 0.94
RNF40-203ENST00000493683 OTULINQ96BN8 352 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 WNK4Q96J92 1243 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 NDEL1Q9GZM8 345 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 GIMAP4Q9NUV9 329 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 TSR3Q9UJK0 312 aaKnown RBP20.94■□□□□ 0.94
RNF40-203ENST00000493683 DTNAQ9Y4J8 743 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 IFNEQ86WN2 208 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 GALNT4Q8N4A0 578 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 TFB1MQ8WVM0 346 aaKnown RBP20.94■□□□□ 0.94
RNF40-203ENST00000493683 KIAA1257Q9ULG3 409 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 SOX13Q9UN79 622 aa20.94■□□□□ 0.94
RNF40-203ENST00000493683 CSF1RP07333 972 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 PRKCEQ02156 737 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 ILF2Q12905 390 aaKnown RBP20.93■□□□□ 0.94
RNF40-203ENST00000493683 SNX31Q8N9S9 440 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 ENGASEQ8NFI3 743 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 OTUD5Q96G74 571 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 SLCO1B7G3V0H7 640 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 BAATQ14032 418 aaPredicted RBP20.93■□□□□ 0.94
RNF40-203ENST00000493683 SLC7A14Q8TBB6 771 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 TRIM49D1C9J1S8 452 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 RASSF9O75901 435 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 SLC2A3P11169 496 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 CYB5D1Q6P9G0 228 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 VCPKMTQ9H867 229 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 PRR12Q9ULL5 1215 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 KCNH4Q9UQ05 1017 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 GLI2P10070 1586 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 SNTNA6NMZ2 147 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 CAND2O75155 1236 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 MYCP01106 439 aaPredicted RBP20.93■□□□□ 0.94
RNF40-203ENST00000493683 GEMP55040 296 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 MOXD1Q6UVY6 613 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 LRRC6Q86X45 466 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 MICU2Q8IYU8 434 aa20.93■□□□□ 0.94
RNF40-203ENST00000493683 CELF4Q9BZC1 486 aaKnown RBP20.93■□□□□ 0.94
RNF40-203ENST00000493683 TIMM44O43615 452 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 USP1O94782 785 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 PYGMP11217 842 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 RARGP13631 454 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 HNRNPH1P31943 449 aaKnown RBP20.92■□□□□ 0.94
RNF40-203ENST00000493683 SEC24CP53992 1094 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 ANTXR2P58335 489 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 PLOD1Q02809 727 aaPredicted RBP20.92■□□□□ 0.94
RNF40-203ENST00000493683 ZNF669Q96BR6 464 aaPredicted RBP20.92■□□□□ 0.94
RNF40-203ENST00000493683 ZNF668Q96K58 619 aaPredicted RBP20.92■□□□□ 0.94
RNF40-203ENST00000493683 PHTF1Q9UMS5 762 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 POLRMTO00411 1230 aaKnown RBP20.92■□□□□ 0.94
RNF40-203ENST00000493683 SLC25A27O95847 323 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 TTLL9Q3SXZ7 439 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 KIF2BQ8N4N8 673 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 USP33Q8TEY7 942 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 NMRK1Q9NWW6 199 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 DLGAP2Q9P1A6 1054 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 TRIM66O15016 1216 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 NQO1P15559 274 aaKnown RBP20.92■□□□□ 0.94
RNF40-203ENST00000493683 HMGCS2P54868 508 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 LRRC74AQ0VAA2 488 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 PDK2Q15119 407 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 MAPRE1Q15691 268 aaKnown RBP20.92■□□□□ 0.94
RNF40-203ENST00000493683 IL31Q6EBC2 164 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 A0A0A6YYK5 440 aaPredicted RBP20.92■□□□□ 0.94
RNF40-203ENST00000493683 MTMR2Q13614 643 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 NLRP9Q7RTR0 991 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 KDELC2Q7Z4H8 507 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 REXO1L1PQ8IX06 675 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 TBC1D16Q8TBP0 767 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 ACTRT1Q8TDG2 376 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 EFCAB1Q9HAE3 211 aa20.92■□□□□ 0.94
RNF40-203ENST00000493683 EIF3LQ9Y262 564 aaKnown RBP20.92■□□□□ 0.94
RNF40-203ENST00000493683 HBP1O60381 514 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 KRT75O95678 551 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 RGS2P41220 211 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 SERPINB8P50452 374 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 HPCAP84074 193 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 ARID3BQ8IVW6 561 aaPredicted RBP20.91■□□□□ 0.94
RNF40-203ENST00000493683 PPP2R3CQ969Q6 453 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 ZNF518BQ9C0D4 1074 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 MTIF3Q9H2K0 278 aaKnown RBP20.91■□□□□ 0.94
RNF40-203ENST00000493683 RNF181Q9P0P0 153 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 ANXA11P50995 505 aaKnown RBP20.91■□□□□ 0.94
RNF40-203ENST00000493683 TP53BP2Q13625 1128 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 LRRC34Q8IZ02 419 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 INPP5DQ92835 1189 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 STMN3Q9NZ72 180 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 STK25O00506 426 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 HMGB3O15347 200 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms