RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 KIF26AQ9ULI4 1882 aaPredicted RBP18.71■□□□□ 0.59
COL9A1-210ENST00000493682 OTOL1A6NHN0 477 aaPredicted RBP18.71■□□□□ 0.59
COL9A1-210ENST00000493682 DDX6P26196 483 aaKnown RBP eCLIP18.71■□□□□ 0.59
COL9A1-210ENST00000493682 TFAMQ00059 246 aaKnown RBP18.71■□□□□ 0.59
COL9A1-210ENST00000493682 TSPY1Q01534 308 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 BFSP1Q12934 665 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 TMEM196Q5HYL7 178 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 TXNDC8Q6A555 127 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 TRIM68Q6AZZ1 485 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 FSTL4Q6MZW2 842 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 PDCL2Q8N4E4 241 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 STKLD1Q8NE28 680 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 RIN3Q8TB24 985 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 CHFRQ96EP1 664 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 SEL1LQ9UBV2 794 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 CLIC4Q9Y696 253 aa18.71■□□□□ 0.59
COL9A1-210ENST00000493682 TCHHQ07283 1943 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 MYMKA6NI61 221 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 TULP1O00294 542 aaPredicted RBP18.7■□□□□ 0.58
COL9A1-210ENST00000493682 GDF9O60383 454 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 PRPF40AO75400 957 aaKnown RBP18.7■□□□□ 0.58
COL9A1-210ENST00000493682 CSH1P0DML2 217 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 CSH2P0DML3 217 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 POLR2BP30876 1174 aaKnown RBP18.7■□□□□ 0.58
COL9A1-210ENST00000493682 GRSF1Q12849 480 aaKnown RBP eCLIP18.7■□□□□ 0.58
COL9A1-210ENST00000493682 NFE2Q16621 373 aaPredicted RBP18.7■□□□□ 0.58
COL9A1-210ENST00000493682 L1TD1Q5T7N2 865 aaKnown RBP18.7■□□□□ 0.58
COL9A1-210ENST00000493682 SDHAF4Q5VUM1 108 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 MON1AQ86VX9 555 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 BRSK2Q8IWQ3 736 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 C1orf127Q8N9H9 656 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 ZSWIM2Q8NEG5 633 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 LEO1Q8WVC0 666 aaPredicted RBP18.7■□□□□ 0.58
COL9A1-210ENST00000493682 DNAJC19Q96DA6 116 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 SAAL1Q96ER3 474 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 ACCSQ96QU6 501 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 KIF9Q9HAQ2 790 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 TBC1D7Q9P0N9 293 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 CCDC39Q9UFE4 941 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 L1RE1Q9UN81 338 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 MAGED2Q9UNF1 606 aaPredicted RBP18.7■□□□□ 0.58
COL9A1-210ENST00000493682 AGAP1Q9UPQ3 857 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 EXOC7Q9UPT5 735 aa18.7■□□□□ 0.58
COL9A1-210ENST00000493682 SPTBN2O15020 2390 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 SOBPA7XYQ1 873 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 TRDMT1O14717 391 aaKnown RBP18.69■□□□□ 0.58
COL9A1-210ENST00000493682 ITGB3P05106 788 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 ADRB1P08588 477 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 ARSAP15289 507 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 GAP43P17677 238 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 ACAT1P24752 427 aaKnown RBP18.69■□□□□ 0.58
COL9A1-210ENST00000493682 PXNP49023 591 aaPredicted RBP18.69■□□□□ 0.58
COL9A1-210ENST00000493682 DDR2Q16832 855 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 PPM1JQ5JR12 505 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 RRAGBQ5VZM2 374 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 SCARA3Q6AZY7 606 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 GAB3Q8WWW8 586 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 MRPS31Q92665 395 aaKnown RBP18.69■□□□□ 0.58
COL9A1-210ENST00000493682 ACBD6Q9BR61 282 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 ABCB6Q9NP58 842 aa18.69■□□□□ 0.58
COL9A1-210ENST00000493682 DDX43Q9NXZ2 648 aaKnown RBP18.69■□□□□ 0.58
COL9A1-210ENST00000493682 RBAKQ9NYW8 714 aaPredicted RBP18.69■□□□□ 0.58
COL9A1-210ENST00000493682 FBXO2Q9UK22 296 aaPredicted RBP18.69■□□□□ 0.58
COL9A1-210ENST00000493682 CCDC163A0A0D9SF12 145 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 VPS37CA5D8V6 355 aaPredicted RBP18.68■□□□□ 0.58
COL9A1-210ENST00000493682 FOXD2O60548 495 aaPredicted RBP18.68■□□□□ 0.58
COL9A1-210ENST00000493682 HUS1O60921 280 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 ATG13O75143 517 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 GCNT3O95395 438 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 CYP2F1P24903 491 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 CASP5P51878 434 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 RPL10AP62906 217 aaKnown RBP18.68■□□□□ 0.58
COL9A1-210ENST00000493682 ZNF268Q14587 947 aaPredicted RBP18.68■□□□□ 0.58
COL9A1-210ENST00000493682 INTS6LQ5JSJ4 861 aaKnown RBP18.68■□□□□ 0.58
COL9A1-210ENST00000493682 CC2D1AQ6P1N0 951 aaPredicted RBP18.68■□□□□ 0.58
COL9A1-210ENST00000493682 SV2BQ7L1I2 683 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 LRRC52Q8N7C0 313 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 CXorf38Q8TB03 319 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 CACTINQ8WUQ7 758 aaKnown RBP18.68■□□□□ 0.58
COL9A1-210ENST00000493682 FAM84AQ96KN4 292 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 CLIC6Q96NY7 704 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 PKMYT1Q99640 499 aa18.68■□□□□ 0.58
COL9A1-210ENST00000493682 UPF2Q9HAU5 1272 aaKnown RBP18.68■□□□□ 0.58
COL9A1-210ENST00000493682 FBRSL1Q9HCM7 1045 aaKnown RBP18.68■□□□□ 0.58
COL9A1-210ENST00000493682 SRPRBQ9Y5M8 271 aaKnown RBP18.68■□□□□ 0.58
COL9A1-210ENST00000493682 DENND4CQ5VZ89 1909 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 AXIN1O15169 862 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 TADA3O75528 432 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 RPP40O75818 363 aaKnown RBP18.67■□□□□ 0.58
COL9A1-210ENST00000493682 NOL4O94818 638 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 EGFP01133 1207 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 GARTP22102 1010 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 AMPD2Q01433 879 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 MYL7Q01449 175 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 PDGFRLQ15198 375 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 TMEM86AQ8N2M4 240 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 CSGALNACT2Q8N6G5 542 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 OLFML3Q9NRN5 406 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 GDAP2Q9NXN4 497 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 UXTQ9UBK9 157 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms