RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CAVIN2O95810 425 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 ARSAP15289 507 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 NMT1P30419 496 aaKnown RBP19.08■□□□□ 0.64
NUP50-218ENST00000493456 ABCD1P33897 745 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 TAF6P49848 677 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 GALK1P51570 392 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 CREB5Q02930 508 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 CPA6Q8N4T0 437 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 RPLP0P6Q8NHW5 317 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 CCDC26Q8TAB7 109 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 CCSER1Q9C0I3 900 aa19.08■□□□□ 0.64
NUP50-218ENST00000493456 BAHCC1Q9P281 2608 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 NPHP3-ACAD11A0A0J9YXS1 232 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 BCLAF3A2AJT9 711 aaKnown RBP19.07■□□□□ 0.64
NUP50-218ENST00000493456 CSH1P0DML2 217 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 CSH2P0DML3 217 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 HMGA1P17096 107 aaKnown RBP19.07■□□□□ 0.64
NUP50-218ENST00000493456 GJA4P35212 333 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 ATP2C1P98194 919 aaPredicted RBP19.07■□□□□ 0.64
NUP50-218ENST00000493456 DMC1Q14565 340 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 TMEM119Q4V9L6 283 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 ARSHQ5FYA8 562 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 TXNDC8Q6A555 127 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 LRRTM3Q86VH5 581 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 MON1AQ86VX9 555 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 PYM1Q9BRP8 204 aaKnown RBP19.07■□□□□ 0.64
NUP50-218ENST00000493456 FBRSL1Q9HCM7 1045 aaKnown RBP19.07■□□□□ 0.64
NUP50-218ENST00000493456 UXTQ9UBK9 157 aaPredicted RBP19.07■□□□□ 0.64
NUP50-218ENST00000493456 RALYQ9UKM9 306 aaKnown RBP19.07■□□□□ 0.64
NUP50-218ENST00000493456 PCDHB5Q9Y5E4 795 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 DENND4CQ5VZ89 1909 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 ATRXP46100 2492 aa19.07■□□□□ 0.64
NUP50-218ENST00000493456 ANK1P16157 1881 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 LNP1A1A4G5 178 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 C4orf47A7E2U8 309 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 ZNF131P52739 623 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 ZNF252P-AS1Q0IIN9 211 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 MTF1Q14872 753 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 KDF1Q8NAX2 398 aaPredicted RBP19.06■□□□□ 0.64
NUP50-218ENST00000493456 RIN3Q8TB24 985 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 CD101Q93033 1021 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 ATP2A3Q93084 1043 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 ZSCAN31Q96LW9 406 aaPredicted RBP19.06■□□□□ 0.64
NUP50-218ENST00000493456 PLIN2Q99541 437 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 REEP2Q9BRK0 252 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 ECT2Q9H8V3 914 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 PARVGQ9HBI0 331 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 SH2B1Q9NRF2 756 aaPredicted RBP19.06■□□□□ 0.64
NUP50-218ENST00000493456 POLR3BQ9NW08 1133 aaPredicted RBP19.06■□□□□ 0.64
NUP50-218ENST00000493456 ZMIZ1Q9ULJ6 1067 aa19.06■□□□□ 0.64
NUP50-218ENST00000493456 TMEM8BA6NDV4 472 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 C1QTNF9BB2RNN3 333 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 SLC26A4O43511 780 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 C1QTNF9P0C862 333 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 CDR1P51861 262 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 TSPY1Q01534 308 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 POU5F1Q01860 360 aaKnown RBP19.05■□□□□ 0.64
NUP50-218ENST00000493456 FAM160A1Q05DH4 1040 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 NFE2Q16621 373 aaPredicted RBP19.05■□□□□ 0.64
NUP50-218ENST00000493456 SV2CQ496J9 727 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 RILPL1Q5EBL4 403 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 WSCD1Q658N2 575 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 MYCT1Q8N699 235 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 LEO1Q8WVC0 666 aaPredicted RBP19.05■□□□□ 0.64
NUP50-218ENST00000493456 OSCP1Q8WVF1 389 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 ZNF560Q96MR9 790 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 TMEM206Q9H813 350 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 DUS2Q9NX74 493 aaKnown RBP19.05■□□□□ 0.64
NUP50-218ENST00000493456 DPP3Q9NY33 737 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 DMXL2Q8TDJ6 3036 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 OBSL1O75147 1896 aa19.05■□□□□ 0.64
NUP50-218ENST00000493456 VWA3AA6NCI4 1184 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 DCLK1O15075 740 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 FAM13AO94988 1023 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 IGF2RP11717 2491 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 CEACAM1P13688 526 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 GBP1P32455 592 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 SCN1AP35498 2009 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 ZNF77Q15935 545 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 USP39Q53GS9 565 aaKnown RBP19.04■□□□□ 0.64
NUP50-218ENST00000493456 SH3PXD2AQ5TCZ1 1133 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 PMS2CLQ68D20 193 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 SLC39A4Q6P5W5 647 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 GPBP1Q86WP2 473 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 TRMT2BQ96GJ1 504 aaKnown RBP19.04■□□□□ 0.64
NUP50-218ENST00000493456 TMEM9BQ9NQ34 198 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 MAGED2Q9UNF1 606 aaPredicted RBP19.04■□□□□ 0.64
NUP50-218ENST00000493456 WASF3Q9UPY6 502 aa19.04■□□□□ 0.64
NUP50-218ENST00000493456 ZNF638Q14966 1978 aaKnown RBP19.04■□□□□ 0.64
NUP50-218ENST00000493456 AKAP13Q12802 2813 aa19.03■□□□□ 0.64
NUP50-218ENST00000493456 KIAA1549LQ6ZVL6 1849 aa19.03■□□□□ 0.64
NUP50-218ENST00000493456 FREM2Q5SZK8 3169 aa19.03■□□□□ 0.64
NUP50-218ENST00000493456 KPNA7A9QM74 516 aa19.03■□□□□ 0.64
NUP50-218ENST00000493456 GIPC1O14908 333 aa19.03■□□□□ 0.64
NUP50-218ENST00000493456 KHNYNO15037 678 aaKnown RBP19.03■□□□□ 0.64
NUP50-218ENST00000493456 TRAK2O60296 914 aa19.03■□□□□ 0.64
NUP50-218ENST00000493456 PRPF40AO75400 957 aaKnown RBP19.03■□□□□ 0.64
NUP50-218ENST00000493456 CSRP1P21291 193 aaKnown RBP19.03■□□□□ 0.64
NUP50-218ENST00000493456 PNPLA4P41247 253 aa19.03■□□□□ 0.64
NUP50-218ENST00000493456 IFNAR2P48551 515 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms