RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 RNF225M0QZC1 329 aaPredicted RBP16.77■□□□□ 0.28
HPS4-216ENST00000493455 CYP26A1O43174 497 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 CCDC130P13994 396 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 ADORA2BP29275 332 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 CASP14P31944 242 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 STAT1P42224 750 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 MRE11P49959 708 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 RAD23BP54727 409 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 PDE12Q6L8Q7 609 aaKnown RBP16.77■□□□□ 0.28
HPS4-216ENST00000493455 RNF19BQ6ZMZ0 732 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 LRRTM3Q86VH5 581 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 DEFB123Q8N688 67 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 C12orf29Q8N999 325 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 SLC4A11Q8NBS3 891 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 MYLIPQ8WY64 445 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 SHC3Q92529 594 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 MYLPFQ96A32 169 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 RHOBTB2Q9BYZ6 727 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 GPR88Q9GZN0 384 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 ZCWPW1Q9H0M4 648 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 TLE6Q9H808 572 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 ACP6Q9NPH0 428 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 TMLHEQ9NVH6 421 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 CHD7Q9P2D1 2997 aa16.77■□□□□ 0.28
HPS4-216ENST00000493455 FAM170AA1A519 330 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 WDR27A2RRH5 827 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 CLDN5O00501 218 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 LILRB3O75022 631 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 GYPCP04921 128 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 FAM163BP0C2L3 166 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 BRD2P25440 801 aaKnown RBP16.76■□□□□ 0.27
HPS4-216ENST00000493455 GTF2F1P35269 517 aaKnown RBP eCLIP16.76■□□□□ 0.27
HPS4-216ENST00000493455 SOX5P35711 763 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 ADGRE1Q14246 886 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 TCEAL5Q5H9L2 206 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 EP400NLQ6ZTU2 488 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 SPATA2LQ8IUW3 424 aaPredicted RBP16.76■□□□□ 0.27
HPS4-216ENST00000493455 ZNF397Q8NF99 534 aaPredicted RBP16.76■□□□□ 0.27
HPS4-216ENST00000493455 PPP2R3CQ969Q6 453 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 NSUN3Q9H649 340 aaKnown RBP16.76■□□□□ 0.27
HPS4-216ENST00000493455 RXFP1Q9HBX9 757 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 FNIP2Q9P278 1114 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 DAAM1Q9Y4D1 1078 aa16.76■□□□□ 0.27
HPS4-216ENST00000493455 PTPRDP23468 1912 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 THAP12O43422 761 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 TBC1D4O60343 1298 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 CLASP2O75122 1294 aaKnown RBP16.75■□□□□ 0.27
HPS4-216ENST00000493455 GLUD1P00367 558 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 GNA15P30679 374 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 FXR1P51114 621 aaKnown RBP eCLIP16.75■□□□□ 0.27
HPS4-216ENST00000493455 JAM2P57087 298 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 ADCY1Q08828 1119 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 TRIM14Q14142 442 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 ASIC2Q16515 512 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 SGO2Q562F6 1265 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 SFMBT2Q5VUG0 894 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 TAF3Q5VWG9 929 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 SLC8B1Q6J4K2 584 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 ATAD1Q8NBU5 361 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 SLC2A14Q8TDB8 520 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 BAP1Q92560 729 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 JAKMIP2Q96AA8 810 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 PCED1BQ96HM7 432 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 SEPT5Q99719 369 aaPredicted RBP16.75■□□□□ 0.27
HPS4-216ENST00000493455 OXCT2Q9BYC2 517 aaPredicted RBP16.75■□□□□ 0.27
HPS4-216ENST00000493455 TTYH3Q9C0H2 523 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 SLC27A5Q9Y2P5 690 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 LUC7L2Q9Y383 392 aaKnown RBP16.75■□□□□ 0.27
HPS4-216ENST00000493455 PCDHB5Q9Y5E4 795 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 IRAK3Q9Y616 596 aa16.75■□□□□ 0.27
HPS4-216ENST00000493455 MTCL1Q9Y4B5 1905 aaKnown RBP16.74■□□□□ 0.27
HPS4-216ENST00000493455 MTMR11A4FU01 709 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 TGM5O43548 720 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 EPCAMP16422 314 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 ELF1P32519 619 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 CLCN1P35523 988 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 KRT9P35527 623 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 ADKP55263 362 aaKnown RBP16.74■□□□□ 0.27
HPS4-216ENST00000493455 RBM10P98175 930 aaKnown RBP16.74■□□□□ 0.27
HPS4-216ENST00000493455 PTK2Q05397 1052 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 GPR17Q13304 367 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 GOLGA7BQ2TAP0 167 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 MGAT5BQ3V5L5 792 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 FIGNQ5HY92 759 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 PPP1R26Q5T8A7 1209 aaPredicted RBP16.74■□□□□ 0.27
HPS4-216ENST00000493455 C4orf50Q6ZRC1 276 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 SLC47A2Q86VL8 602 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 SCN4BQ8IWT1 228 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 FAM71AQ8IYT1 594 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 TTC9BQ8N6N2 239 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 MYCBPAPQ8TBZ2 947 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 ANP32BQ92688 251 aaKnown RBP16.74■□□□□ 0.27
HPS4-216ENST00000493455 CYFIP2Q96F07 1278 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 CDX2Q99626 313 aaPredicted RBP16.74■□□□□ 0.27
HPS4-216ENST00000493455 B3GNT5Q9BYG0 378 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 PDCL3Q9H2J4 239 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 CYP4F11Q9HBI6 524 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 CAPN11Q9UMQ6 739 aa16.74■□□□□ 0.27
HPS4-216ENST00000493455 MTCH2Q9Y6C9 303 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms