RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 DPP3Q9NY33 737 aa23.17■■□□□ 1.3
PFDN4-205ENST00000493356 TISP43B9A030 160 aa23.16■■□□□ 1.3
PFDN4-205ENST00000493356 ANKRD63C9JTQ0 380 aa23.16■■□□□ 1.3
PFDN4-205ENST00000493356 SLC26A4O43511 780 aa23.16■■□□□ 1.3
PFDN4-205ENST00000493356 ARSAP15289 507 aa23.16■■□□□ 1.3
PFDN4-205ENST00000493356 DDX6P26196 483 aaKnown RBP eCLIP23.16■■□□□ 1.3
PFDN4-205ENST00000493356 MPLP40238 635 aa23.16■■□□□ 1.3
PFDN4-205ENST00000493356 SHC2P98077 582 aa23.16■■□□□ 1.3
PFDN4-205ENST00000493356 GTF2BQ00403 316 aa23.16■■□□□ 1.3
PFDN4-205ENST00000493356 TXNDC8Q6A555 127 aa23.16■■□□□ 1.3
PFDN4-205ENST00000493356 AK8Q96MA6 479 aa23.16■■□□□ 1.3
PFDN4-205ENST00000493356 BLOC1S4Q9NUP1 217 aa23.16■■□□□ 1.3
PFDN4-205ENST00000493356 AMPD2Q01433 879 aa23.15■■□□□ 1.3
PFDN4-205ENST00000493356 ADALQ6DHV7 355 aa23.15■■□□□ 1.3
PFDN4-205ENST00000493356 DCP1BQ8IZD4 617 aaKnown RBP23.15■■□□□ 1.3
PFDN4-205ENST00000493356 CALML4Q96GE6 196 aa23.15■■□□□ 1.3
PFDN4-205ENST00000493356 HHIPQ96QV1 700 aa23.15■■□□□ 1.3
PFDN4-205ENST00000493356 ZHX3Q9H4I2 956 aa23.15■■□□□ 1.3
PFDN4-205ENST00000493356 TMLHEQ9NVH6 421 aa23.15■■□□□ 1.3
PFDN4-205ENST00000493356 KIF3AQ9Y496 699 aa23.15■■□□□ 1.3
PFDN4-205ENST00000493356 PCDHB5Q9Y5E4 795 aa23.15■■□□□ 1.3
PFDN4-205ENST00000493356 SOBPA7XYQ1 873 aa23.14■■□□□ 1.29
PFDN4-205ENST00000493356 DRD1P21728 446 aa23.14■■□□□ 1.29
PFDN4-205ENST00000493356 ABCD1P33897 745 aa23.14■■□□□ 1.29
PFDN4-205ENST00000493356 GALK1P51570 392 aa23.14■■□□□ 1.29
PFDN4-205ENST00000493356 PLK5Q496M5 336 aa23.14■■□□□ 1.29
PFDN4-205ENST00000493356 NAIF1Q69YI7 327 aaPredicted RBP23.14■■□□□ 1.29
PFDN4-205ENST00000493356 CC2D1AQ6P1N0 951 aaPredicted RBP23.14■■□□□ 1.29
PFDN4-205ENST00000493356 MON1AQ86VX9 555 aa23.14■■□□□ 1.29
PFDN4-205ENST00000493356 EFCAB13Q8IY85 973 aa23.14■■□□□ 1.29
PFDN4-205ENST00000493356 STKLD1Q8NE28 680 aa23.14■■□□□ 1.29
PFDN4-205ENST00000493356 MRPS31Q92665 395 aaKnown RBP23.14■■□□□ 1.29
PFDN4-205ENST00000493356 LSM14BQ9BX40 385 aaKnown RBP23.14■■□□□ 1.29
PFDN4-205ENST00000493356 VPS45Q9NRW7 570 aa23.14■■□□□ 1.29
PFDN4-205ENST00000493356 AGO2Q9UKV8 859 aaKnown RBP23.14■■□□□ 1.29
PFDN4-205ENST00000493356 STYXL1Q9Y6J8 313 aa23.14■■□□□ 1.29
PFDN4-205ENST00000493356 MYO16Q9Y6X6 1858 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 KIAA1549LQ6ZVL6 1849 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 KPNA7A9QM74 516 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 KRT18P05783 430 aaKnown RBP23.13■■□□□ 1.29
PFDN4-205ENST00000493356 NEFLP07196 543 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 CSH1P0DML2 217 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 CSH2P0DML3 217 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 UBA7P41226 1012 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 GPR15P49685 360 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 MCM6Q14566 821 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 ZNF268Q14587 947 aaPredicted RBP23.13■■□□□ 1.29
PFDN4-205ENST00000493356 PDGFRLQ15198 375 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 SV2CQ496J9 727 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 ZC2HC1CQ53FD0 456 aaPredicted RBP23.13■■□□□ 1.29
PFDN4-205ENST00000493356 P2RY13Q9BPV8 354 aa23.13■■□□□ 1.29
PFDN4-205ENST00000493356 DUSP15Q9H1R2 295 aaPredicted RBP23.13■■□□□ 1.29
PFDN4-205ENST00000493356 MAGED2Q9UNF1 606 aaPredicted RBP23.13■■□□□ 1.29
PFDN4-205ENST00000493356 TBCAO75347 108 aaKnown RBP23.12■■□□□ 1.29
PFDN4-205ENST00000493356 KCNK5O95279 499 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 PLCG1P19174 1290 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 GJA4P35212 333 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 POU5F1Q01860 360 aaKnown RBP23.12■■□□□ 1.29
PFDN4-205ENST00000493356 FBXO43Q4G163 708 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 SLFN12LQ6IEE8 588 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 TCEAL6Q6IPX3 200 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 CRELD2Q6UXH1 353 aaPredicted RBP23.12■■□□□ 1.29
PFDN4-205ENST00000493356 RAD54LQ92698 747 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 TCEAL3Q969E4 200 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 PI4K2AQ9BTU6 479 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 IKZF4Q9H2S9 585 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 PPP4R2Q9NY27 417 aa23.12■■□□□ 1.29
PFDN4-205ENST00000493356 PRPF40AO75400 957 aaKnown RBP23.11■■□□□ 1.29
PFDN4-205ENST00000493356 TADA3O75528 432 aa23.11■■□□□ 1.29
PFDN4-205ENST00000493356 TSPY1Q01534 308 aa23.11■■□□□ 1.29
PFDN4-205ENST00000493356 MTF1Q14872 753 aa23.11■■□□□ 1.29
PFDN4-205ENST00000493356 NFE2Q16621 373 aaPredicted RBP23.11■■□□□ 1.29
PFDN4-205ENST00000493356 SDHAF4Q5VUM1 108 aa23.11■■□□□ 1.29
PFDN4-205ENST00000493356 RNF43Q68DV7 783 aa23.11■■□□□ 1.29
PFDN4-205ENST00000493356 SYT13Q7L8C5 426 aa23.11■■□□□ 1.29
PFDN4-205ENST00000493356 RPLP0P6Q8NHW5 317 aa23.11■■□□□ 1.29
PFDN4-205ENST00000493356 EZH1Q92800 747 aaPredicted RBP23.11■■□□□ 1.29
PFDN4-205ENST00000493356 ZNF560Q96MR9 790 aa23.11■■□□□ 1.29
PFDN4-205ENST00000493356 ST6GALNAC4Q9H4F1 302 aa23.11■■□□□ 1.29
PFDN4-205ENST00000493356 CACNA1GO43497 2377 aa23.11■■□□□ 1.29
PFDN4-205ENST00000493356 KARSQ15046 597 aaKnown RBP23.1■■□□□ 1.29
PFDN4-205ENST00000493356 ELF2Q15723 593 aa23.1■■□□□ 1.29
PFDN4-205ENST00000493356 CPA6Q8N4T0 437 aa23.1■■□□□ 1.29
PFDN4-205ENST00000493356 LEO1Q8WVC0 666 aaPredicted RBP23.1■■□□□ 1.29
PFDN4-205ENST00000493356 EXOC4Q96A65 974 aa23.1■■□□□ 1.29
PFDN4-205ENST00000493356 ECT2Q9H8V3 914 aa23.1■■□□□ 1.29
PFDN4-205ENST00000493356 DCLK1O15075 740 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 NOL4O94818 638 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 IL18RAPO95256 599 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 APBB3O95704 486 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 PNPLA4P41247 253 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 FAM160A1Q05DH4 1040 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 ZNF77Q15935 545 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 DDR2Q16832 855 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 NT5DC4Q86YG4 428 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 PDCL2Q8N4E4 241 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 OSCP1Q8WVF1 389 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 TRMT2BQ96GJ1 504 aaKnown RBP23.09■■□□□ 1.29
PFDN4-205ENST00000493356 ABCB6Q9NP58 842 aa23.09■■□□□ 1.29
PFDN4-205ENST00000493356 UXTQ9UBK9 157 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms