RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 HAUS5O94927 633 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 ITGB2P05107 769 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 JUNP05412 331 aaKnown RBP5.3□□□□□ -1.56
VPS13A-212ENST00000493341 AKT1P31749 480 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 NAP1L1P55209 391 aaKnown RBP5.3□□□□□ -1.56
VPS13A-212ENST00000493341 CHRNDQ07001 517 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 NSUN2Q08J23 767 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS13A-212ENST00000493341 DUSP8Q13202 625 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 SLC5A9Q2M3M2 681 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 FCRL6Q6DN72 434 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 FRMD5Q7Z6J6 570 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 DTX1Q86Y01 620 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 KRT73Q86Y46 540 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 IRF2BP1Q8IU81 584 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 TMEM57Q8N5G2 664 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 TSPYL6Q8N831 410 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 TTLL6Q8N841 843 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 ADAMTS18Q8TE60 1221 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 ZCCHC14Q8WYQ9 949 aaKnown RBP5.3□□□□□ -1.56
VPS13A-212ENST00000493341 ST8SIA4Q92187 359 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 GRAMD1AQ96CP6 724 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 SLC7A6OSQ96CW6 309 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-212ENST00000493341 NOX5Q96PH1 765 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 GPR63Q9BZJ6 419 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 EPC1Q9H2F5 836 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 SMYD2Q9NRG4 433 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 SIRT5Q9NXA8 310 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 ATP11BQ9Y2G3 1177 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 PGPEP1LA6NFU8 196 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 H0Y3Z8 333 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 TMCC2O75069 709 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 VPS4BO75351 444 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 RTN3O95197 1032 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-212ENST00000493341 GLP2RO95838 553 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 VSIG10L2P0DP72 767 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 PFKLP17858 780 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 SSTR4P31391 388 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 IL13P35225 146 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 ATXN1P54253 815 aaKnown RBP5.3□□□□□ -1.56
VPS13A-212ENST00000493341 PRSS36Q5K4E3 855 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 ARMC3Q5W041 872 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 MRNIPQ6NTE8 343 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 NEK10Q6ZWH5 1172 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 KCTD20Q7Z5Y7 419 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 LDHDQ86WU2 507 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 RASGRP3Q8IV61 690 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 AGBL5Q8NDL9 886 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 TMIEQ8NEW7 156 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 C3orf49Q96BT1 292 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 RBM15Q96T37 977 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS13A-212ENST00000493341 IMPG2Q9BZV3 1241 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 PRKRIP1Q9H875 184 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-212ENST00000493341 ORC3Q9UBD5 711 aaPredicted RBP5.3□□□□□ -1.56
VPS13A-212ENST00000493341 DAPP1Q9UN19 280 aa5.3□□□□□ -1.56
VPS13A-212ENST00000493341 IRS2Q9Y4H2 1338 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 CCDC196A0A1B0GTZ2 297 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 CDHR4A6H8M9 788 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 AGFG2O95081 481 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 TK1P04183 234 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 PRKCBP05771 671 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 HNRNPA1P09651 372 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS13A-212ENST00000493341 KLRK1P26718 216 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 MST1P26927 711 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 COPB2P35606 906 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 RAD52P43351 418 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 GZMKP49863 264 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 CLNS1AP54105 237 aaKnown RBP5.29□□□□□ -1.56
VPS13A-212ENST00000493341 TERF1P54274 439 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 VAMP2P63027 116 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 RPS6KA2Q15349 733 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 NPY5RQ15761 445 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 TRIM71Q2Q1W2 868 aaKnown RBP5.29□□□□□ -1.56
VPS13A-212ENST00000493341 BTBD16Q32M84 506 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 VWA3BQ502W6 1294 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 WDR45BQ5MNZ6 344 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 CACHD1Q5VU97 1274 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 SIAH1Q8IUQ4 282 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 NUDT10Q8NFP7 164 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 OR14K1Q8NGZ2 314 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 RFFLQ8WZ73 363 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 SCAMP4Q969E2 229 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 NUDT11Q96G61 164 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 SPATA5L1Q9BVQ7 753 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 AGXT2Q9BYV1 514 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 TTYH3Q9C0H2 523 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 SIK2Q9H0K1 926 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 TP63Q9H3D4 680 aaPredicted RBP5.29□□□□□ -1.56
VPS13A-212ENST00000493341 ELAC1Q9H777 363 aaKnown RBP5.29□□□□□ -1.56
VPS13A-212ENST00000493341 CHODLQ9H9P2 273 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 L2HGDHQ9H9P8 463 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 GPR34Q9UPC5 381 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 DTNAQ9Y4J8 743 aa5.29□□□□□ -1.56
VPS13A-212ENST00000493341 PNPLA7Q6ZV29 1317 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 NTSR2O95665 410 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 SNRPA1P09661 255 aaKnown RBP5.28□□□□□ -1.56
VPS13A-212ENST00000493341 KRT20P35900 424 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 PTTG1IPP53801 180 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 LRP8Q14114 963 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 INSCQ1MX18 579 aa5.28□□□□□ -1.56
VPS13A-212ENST00000493341 SLC9C2Q5TAH2 1124 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 702.3 ms