RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 MRPS17Q9Y2R5 130 aaKnown RBP12.34□□□□□ -0.43
LRTM1-202ENST00000493075 NOTCH4Q99466 2003 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 PTPRJQ12913 1337 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 A0A1W2PQ27 194 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 A0A1W2PQ64 194 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 A0A1W2PQD8 194 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 ZNF263O14978 683 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 CHADO15335 359 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.44
LRTM1-202ENST00000493075 CST3P01034 146 aaPredicted RBP12.33□□□□□ -0.44
LRTM1-202ENST00000493075 CSH1P0DML2 217 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 CSH2P0DML3 217 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 DLATP10515 647 aaKnown RBP12.33□□□□□ -0.44
LRTM1-202ENST00000493075 HMGA1P17096 107 aaKnown RBP12.33□□□□□ -0.44
LRTM1-202ENST00000493075 TNNI1P19237 187 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 GDI1P31150 447 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 RPS9P46781 194 aaKnown RBP12.33□□□□□ -0.44
LRTM1-202ENST00000493075 CYP2J2P51589 502 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 AP3M2P53677 418 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 STK4Q13043 487 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 GRM2Q14416 872 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 CFAP221Q4G0U5 840 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 GPR158Q5T848 1215 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 LMBRD2Q68DH5 695 aaPredicted RBP12.33□□□□□ -0.44
LRTM1-202ENST00000493075 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 OSTM1Q86WC4 334 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 SLC9A9Q8IVB4 645 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 ARID3BQ8IVW6 561 aaPredicted RBP12.33□□□□□ -0.44
LRTM1-202ENST00000493075 GRAMD1CQ8IYS0 662 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 FAM84AQ96KN4 292 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 CGRRF1Q99675 332 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 SEMA4AQ9H3S1 761 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 HEBP1Q9NRV9 189 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 EXOC1Q9NV70 894 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 DMAC2Q9NW81 257 aa12.33□□□□□ -0.44
LRTM1-202ENST00000493075 SHISA7A6NL88 538 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 ARNTLO00327 626 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 PDXKO00764 312 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 GFRA3O60609 400 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 EXOC3O60645 756 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 TACC1O75410 805 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 F11P03951 625 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 WARSP23381 471 aaKnown RBP12.32□□□□□ -0.44
LRTM1-202ENST00000493075 DDX6P26196 483 aaKnown RBP eCLIP12.32□□□□□ -0.44
LRTM1-202ENST00000493075 ATICP31939 592 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 MAGEA11P43364 429 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 SYKP43405 635 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 CLDN10P78369 228 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 FZD5Q13467 585 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 UBXN2BQ14CS0 331 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 KMT5BQ4FZB7 885 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 C1orf228Q6PIY5 440 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 TPRG1Q6ZUI0 275 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 KIAA0895Q8NCT3 520 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 GIPC2Q8TF65 315 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 KBTBD7Q8WVZ9 684 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 ZNF516Q92618 1163 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 CCDC127Q96BQ5 260 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 MSANTD3Q96H12 275 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 MYRFLQ96LU7 910 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 CEP295NLQ96MC4 621 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 GCNAQ96QF7 691 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 PI4K2AQ9BTU6 479 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 GTF3C4Q9UKN8 822 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 CDH9Q9ULB4 789 aa12.32□□□□□ -0.44
LRTM1-202ENST00000493075 MTF2Q9Y483 593 aaPredicted RBP12.32□□□□□ -0.44
LRTM1-202ENST00000493075 PIEZO1Q92508 2521 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 MYBPHLA2RUH7 354 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 DPYSL4O14531 572 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 LRRN2O75325 713 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 NOL4O94818 638 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 KIF20AO95235 890 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 CD72P21854 359 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 ACAT1P24752 427 aaKnown RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 CYP2F1P24903 491 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 TARSP26639 723 aaKnown RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 NDUFA8P51970 172 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 NLRP12P59046 1061 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 MAPRE1Q15691 268 aaKnown RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 ARHGAP29Q52LW3 1261 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 STXBP5Q5T5C0 1151 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 C4orf50Q6ZRC1 276 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 SPATA2LQ8IUW3 424 aaPredicted RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 ZNF687Q8N1G0 1237 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 PARD3BQ8TEW8 1205 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 CCDC47Q96A33 483 aaKnown RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 RSPRY1Q96DX4 576 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 TRMT2BQ96GJ1 504 aaKnown RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 SLC46A2Q9BY10 475 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 KCTD10Q9H3F6 313 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 C8orf33Q9H7E9 229 aaPredicted RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 MAGEC2Q9UBF1 373 aaPredicted RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 UXTQ9UBK9 157 aaPredicted RBP12.31□□□□□ -0.44
LRTM1-202ENST00000493075 FBXO4Q9UKT5 387 aa12.31□□□□□ -0.44
LRTM1-202ENST00000493075 DOCK6Q96HP0 2047 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms