RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 GPX6P59796 221 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 PLCB3Q01970 1234 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 SGSM1Q2NKQ1 1148 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 POLNQ7Z5Q5 900 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 GIMAP7Q8NHV1 300 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 STAMBPL1Q96FJ0 436 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 L3MBTL3Q96JM7 780 aaPredicted RBP16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 SMC6Q96SB8 1091 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 CXorf56Q9H5V9 222 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 EBF2Q9HAK2 575 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 SAE1Q9UBE0 346 aaPredicted RBP16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 SLC24A2Q9UI40 661 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 PHTF1Q9UMS5 762 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 CLUHO75153 1309 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 A8MUI8 341 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 ABLIM1O14639 778 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 TYROBPO43914 113 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 MAFO75444 373 aaPredicted RBP16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 UNC5CO95185 931 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 SLC25A11Q02978 314 aaKnown RBP16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 GAD2Q05329 585 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 MOGSQ13724 837 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 PDK4Q16654 411 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 ARFGAP1Q8N6T3 406 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 TCHPQ9BT92 498 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 MRPL4Q9BYD3 311 aaKnown RBP16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 PPCSQ9HAB8 311 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 SLCO1B3Q9NPD5 702 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 NRBP2Q9NSY0 501 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 L3MBTL1Q9Y468 752 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 ANK1P16157 1881 aa16.97■□□□□ 0.31
SEMA4D-220ENST00000492386 A0A1W2PPM1 405 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 GOLGA8SH3BPF8 625 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 GOLGA8MH3BSY2 632 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 ITGBL1O95965 494 aaPredicted RBP16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 RFC1P35251 1148 aaPredicted RBP16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 MSH2P43246 934 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 ASPAP45381 313 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 SLC1A5Q15758 541 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 DUOXA2Q1HG44 320 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 EFHC2Q5JST6 749 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 DENND1BQ6P3S1 775 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 ANKMY2Q8IV38 441 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 ACO2Q99798 780 aaKnown RBP16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 MAK16Q9BXY0 300 aaKnown RBP16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 MYLK2Q9H1R3 596 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 HOXC10Q9NYD6 342 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 PSMC3IPQ9P2W1 217 aaPredicted RBP16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 CPSF3Q9UKF6 684 aaKnown RBP16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 A0A1B0GUA9 196 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 NDC80O14777 642 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 ELF1P32519 619 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 EFNA5P52803 228 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 YARSP54577 528 aaKnown RBP16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 GDF10P55107 478 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 HIF1AQ16665 826 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 PTPN20Q4JDL3 420 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 ANKRD22Q5VYY1 191 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 SCARA5Q6ZMJ2 495 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 ACTL9Q8TC94 416 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 MRRFQ96E11 262 aaKnown RBP16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 THOC1Q96FV9 657 aaKnown RBP16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 XYLT2Q9H1B5 865 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 C10orf88Q9H8K7 445 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 PIM2Q9P1W9 311 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 TJP2Q9UDY2 1190 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 RABGEF1Q9UJ41 708 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 EFR3BQ9Y2G0 817 aa16.96■□□□□ 0.31
SEMA4D-220ENST00000492386 WDR90Q96KV7 1748 aa16.96■□□□□ 0.3
SEMA4D-220ENST00000492386 OGTO15294 1046 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 EDF1O60869 148 aaKnown RBP16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 LRCH4O75427 683 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 HOXC6P09630 235 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 CA4P22748 312 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 PSMA2P25787 234 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 IL1R2P27930 398 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 CTCFP49711 727 aaPredicted RBP16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 STAT5BP51692 787 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 DYNLT1P63172 113 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 OTUD4Q01804 1114 aaKnown RBP16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 MSS51Q4VC12 460 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 CDCA2Q69YH5 1023 aaPredicted RBP16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 JOSD2Q8TAC2 188 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 CPT1BQ92523 772 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 ADAM33Q9BZ11 813 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 CYTH4Q9UIA0 394 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 CHKBQ9Y259 395 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 STK38LQ9Y2H1 464 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 SNCAIPQ9Y6H5 919 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 SIGLEC16A6NMB1 481 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 NFKBIEO00221 500 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 GEMIN4P57678 1058 aaKnown RBP16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 TRPC3Q13507 836 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 EFTUD2Q15029 972 aaKnown RBP eCLIP16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 TAZQ16635 292 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 SMTNL2Q2TAL5 461 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 ZNF699Q32M78 642 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 PCGF5Q86SE9 256 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 PPIL6Q8IXY8 311 aa16.95■□□□□ 0.3
SEMA4D-220ENST00000492386 KIAA0319LQ8IZA0 1049 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms