RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 PCSK1P29120 753 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 AVPR2P30518 371 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 VEPH1Q14D04 833 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 NFIL3Q16649 462 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 C1orf220Q5T0J3 134 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 SDHAF4Q5VUM1 108 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 GAREM2Q75VX8 874 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 ITIH5Q86UX2 942 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 FLCNQ8NFG4 579 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 TIGD1Q96MW7 591 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 ASB16Q96NS5 453 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 SLC2A4RGQ9NR83 387 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 WNT16Q9UBV4 365 aa26.43■■□□□ 1.82
UPF3A-209ENST00000492270 MIA3Q5JRA6 1907 aa26.42■■□□□ 1.82
UPF3A-209ENST00000492270 ECI2O75521 394 aa26.42■■□□□ 1.82
UPF3A-209ENST00000492270 STAU1O95793 577 aaKnown RBP26.42■■□□□ 1.82
UPF3A-209ENST00000492270 PDGFRBP09619 1106 aa26.42■■□□□ 1.82
UPF3A-209ENST00000492270 CYP2F1P24903 491 aa26.42■■□□□ 1.82
UPF3A-209ENST00000492270 TNNC1P63316 161 aa26.42■■□□□ 1.82
UPF3A-209ENST00000492270 TMEM105Q8N8V8 129 aa26.42■■□□□ 1.82
UPF3A-209ENST00000492270 TMC2Q8TDI7 906 aa26.42■■□□□ 1.82
UPF3A-209ENST00000492270 CRTAC1Q9NQ79 661 aa26.42■■□□□ 1.82
UPF3A-209ENST00000492270 RMND1Q9NWS8 449 aa26.42■■□□□ 1.82
UPF3A-209ENST00000492270 NXF1Q9UBU9 619 aaKnown RBP26.42■■□□□ 1.82
UPF3A-209ENST00000492270 NCANO14594 1321 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 ANAPC1Q9H1A4 1944 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 GABRR2P28476 465 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 PRCPP42785 496 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 AP3M2P53677 418 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 NCOA4Q13772 614 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 ZNF658Q5TYW1 1059 aaPredicted RBP26.41■■□□□ 1.82
UPF3A-209ENST00000492270 SPATA20Q8TB22 786 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 SMARCE1Q969G3 411 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 SYAP1Q96A49 352 aaPredicted RBP26.41■■□□□ 1.82
UPF3A-209ENST00000492270 GSDMAQ96QA5 445 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 SLITRK6Q9H5Y7 841 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 IL21Q9HBE4 155 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 CDH9Q9ULB4 789 aa26.41■■□□□ 1.82
UPF3A-209ENST00000492270 SMC2O95347 1197 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 TRIM49P0CI25 452 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 TRIM49CP0CI26 452 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 ATICP31939 592 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 DDR2Q16832 855 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 ZNF699Q32M78 642 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 ZACNQ401N2 412 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 ASTLQ6HA08 431 aaPredicted RBP26.4■■□□□ 1.82
UPF3A-209ENST00000492270 FAM171BQ6P995 826 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 SPATA2LQ8IUW3 424 aaPredicted RBP26.4■■□□□ 1.82
UPF3A-209ENST00000492270 PRSS33Q8NF86 280 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 ZSCAN18Q8TBC5 510 aaPredicted RBP26.4■■□□□ 1.82
UPF3A-209ENST00000492270 MYLPFQ96A32 169 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 ELSPBP1Q96BH3 223 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 EEF2KMTQ96G04 330 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 MKNK1Q9BUB5 465 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 ATXN3LQ9H3M9 355 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 SMYD3Q9H7B4 428 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 ABCB6Q9NP58 842 aa26.4■■□□□ 1.82
UPF3A-209ENST00000492270 ARIH1Q9Y4X5 557 aaPredicted RBP26.4■■□□□ 1.82
UPF3A-209ENST00000492270 MAPK13O15264 365 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 TACC1O75410 805 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 CLSTN1O94985 981 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 VIPR2P41587 438 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 VAMP7P51809 220 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 CYP4F8P98187 520 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 ADAM9Q13443 819 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 GRM2Q14416 872 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 SCARA5Q6ZMJ2 495 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 GPIHBP1Q8IV16 184 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 FAM186BQ8IYM0 893 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 OR6B3Q8NGW1 331 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 SMARCD2Q92925 531 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 SNX25Q9H3E2 840 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 DPEP3Q9H4B8 488 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 ZFP14Q9HCL3 533 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 ARHGEF3Q9NR81 526 aa26.39■■□□□ 1.82
UPF3A-209ENST00000492270 KIF26AQ9ULI4 1882 aaPredicted RBP26.38■■□□□ 1.81
UPF3A-209ENST00000492270 PI15O43692 258 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 HMGA1P17096 107 aaKnown RBP26.38■■□□□ 1.81
UPF3A-209ENST00000492270 GNL1P36915 607 aaPredicted RBP26.38■■□□□ 1.81
UPF3A-209ENST00000492270 RAP1GAPP47736 663 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 TAF12Q16514 161 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 EDRF1Q3B7T1 1238 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 CFAP221Q4G0U5 840 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 ISM2Q6H9L7 571 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 VITQ6UXI7 678 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 SV2AQ7L0J3 742 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 VRTNQ9H8Y1 702 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 CHMP5Q9NZZ3 219 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 MYH10P35580 1976 aa26.38■■□□□ 1.81
UPF3A-209ENST00000492270 KINO60870 393 aaKnown RBP26.37■■□□□ 1.81
UPF3A-209ENST00000492270 RPL13P26373 211 aaKnown RBP26.37■■□□□ 1.81
UPF3A-209ENST00000492270 PSMC2P35998 433 aaKnown RBP26.37■■□□□ 1.81
UPF3A-209ENST00000492270 CDH8P55286 799 aa26.37■■□□□ 1.81
UPF3A-209ENST00000492270 PPP3CAQ08209 521 aa26.37■■□□□ 1.81
UPF3A-209ENST00000492270 ZNF667Q5HYK9 610 aa26.37■■□□□ 1.81
UPF3A-209ENST00000492270 MDH1BQ5I0G3 518 aa26.37■■□□□ 1.81
UPF3A-209ENST00000492270 GPR158Q5T848 1215 aa26.37■■□□□ 1.81
UPF3A-209ENST00000492270 INTS8Q75QN2 995 aaKnown RBP26.37■■□□□ 1.81
UPF3A-209ENST00000492270 SCN4BQ8IWT1 228 aa26.37■■□□□ 1.81
UPF3A-209ENST00000492270 RSPRY1Q96DX4 576 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms