RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 CCDC138Q96M89 665 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 NUP88Q99567 741 aaPredicted RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 CRB3Q9BUF7 120 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 TRIM6Q9C030 488 aaPredicted RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 MSL2Q9HCI7 577 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 DIAPH3Q9NSV4 1193 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 RBM28Q9NW13 759 aaKnown RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 ING3Q9NXR8 418 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 CPSF2Q9P2I0 782 aaKnown RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 STAP2Q9UGK3 403 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 DDX20Q9UHI6 824 aaKnown RBP5.29□□□□□ -1.56
RTN4-215ENST00000491592 TMEM98Q9Y2Y6 226 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 SHROOM2Q13796 1616 aa5.29□□□□□ -1.56
RTN4-215ENST00000491592 KDM5AP29375 1690 aaKnown RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 PLA2R1Q13018 1463 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 TSPY2A6NKD2 308 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 TMEM110-MUSTN1A8MSY1 372 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 M0R3H8 397 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 NRP1O14786 923 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 AREL1O15033 823 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 CDC14BO60729 498 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 PLATP00750 562 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 CD4P01730 458 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 JUNP05412 331 aaKnown RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 ADRB1P08588 477 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 CCDC175P0C221 793 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 TSPY3P0CV98 308 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 TSPY8P0CW00 308 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 DESP17661 470 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 CR2P20023 1033 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 ELF1P32519 619 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 TM4SF4P48230 202 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 SLC16A1P53985 500 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 ADKP55263 362 aaKnown RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 NUCB2P80303 420 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 TSPY1Q01534 308 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 KIF23Q02241 960 aaPredicted RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 PPP3CAQ08209 521 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 MGAT2Q10469 447 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 PPP2R5CQ13362 524 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 RIN1Q13671 783 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 MVPQ14764 893 aaKnown RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 UBE3CQ15386 1083 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 UBXN11Q5T124 520 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 HECTD3Q5T447 861 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 CYB5RLQ6IPT4 315 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 SASS6Q6UVJ0 657 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 ABRAXAS1Q6UWZ7 409 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 BTN2A1Q7KYR7 527 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 CHST15Q7LFX5 561 aaPredicted RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 SRGAP1Q7Z6B7 1085 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 GAS2L3Q86XJ1 694 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 CEP57L1Q8IYX8 460 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 SHCBP1Q8NEM2 672 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 NSUN6Q8TEA1 469 aaKnown RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 IPCEF1Q8WWN9 437 aaPredicted RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 RABGGTAQ92696 567 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 HOXB13Q92826 284 aaPredicted RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 PDLIM2Q96JY6 352 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 SGCZQ96LD1 299 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 LRGUKQ96M69 825 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 TEPSINQ96N21 525 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 GPHA2Q96T91 129 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 RMDN3Q96TC7 470 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 NAA15Q9BXJ9 866 aaKnown RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 GTPBP4Q9BZE4 634 aaKnown RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 C12orf65Q9H3J6 166 aaKnown RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 NMRK2Q9NPI5 230 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 RBM12Q9NTZ6 932 aaKnown RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 NSMCE4AQ9NXX6 385 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 SERPINB13Q9UIV8 391 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 DDX19BQ9UMR2 479 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 DNM3Q9UQ16 869 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 GPR52Q9Y2T5 361 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 RRP15Q9Y3B9 282 aaKnown RBP5.28□□□□□ -1.56
RTN4-215ENST00000491592 REREQ9P2R6 1566 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 DUOX2Q9NRD8 1548 aa5.28□□□□□ -1.56
RTN4-215ENST00000491592 ZNF536O15090 1300 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 RPTORQ8N122 1335 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 MAGI1Q96QZ7 1491 aaPredicted RBP5.27□□□□□ -1.57
RTN4-215ENST00000491592 PMS2P1A4D2B8 440 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 FAM171A2A8MVW0 826 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 H0Y3Z8 333 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 KIF1CO43896 1103 aaKnown RBP5.27□□□□□ -1.57
RTN4-215ENST00000491592 PRICKLE3O43900 615 aaPredicted RBP5.27□□□□□ -1.57
RTN4-215ENST00000491592 AKR1B10O60218 316 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 KIF20AO95235 890 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 IL33O95760 270 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 PYGLP06737 847 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 ATP6V1B1P15313 513 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 GYPEP15421 78 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 RHCEP18577 417 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 ECHS1P30084 290 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 HPDP32754 393 aaPredicted RBP5.27□□□□□ -1.57
RTN4-215ENST00000491592 CD151P48509 253 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 MRPS35P82673 323 aaKnown RBP5.27□□□□□ -1.57
RTN4-215ENST00000491592 RHDQ02161 417 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 DUSP8Q13202 625 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 GALEQ14376 348 aa5.27□□□□□ -1.57
RTN4-215ENST00000491592 UAP1L1Q3KQV9 507 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms