RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 WDR72Q3MJ13 1102 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 ZACNQ401N2 412 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 C1orf220Q5T0J3 134 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 IER5LQ5T953 404 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 TANGO2Q6ICL3 276 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 ZSWIM3Q96MP5 696 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 MKNK1Q9BUB5 465 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 GTPBP4Q9BZE4 634 aaKnown RBP16.29■□□□□ 0.2
COL27A1-206ENST00000490831 MFSD1Q9H3U5 465 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 IL21Q9HBE4 155 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 GTF3C4Q9UKN8 822 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 MAPK8IP1Q9UQF2 711 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 A0A1W2PRU2 124 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 MYBPHLA2RUH7 354 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 SMC2O95347 1197 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 VNN1O95497 513 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 HMGA1P17096 107 aaKnown RBP16.28■□□□□ 0.2
COL27A1-206ENST00000490831 GJA1P17302 382 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 RPL13P26373 211 aaKnown RBP16.28■□□□□ 0.2
COL27A1-206ENST00000490831 WEE1P30291 646 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 PLA2G5P39877 138 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 MAGEA11P43364 429 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 ZNF658Q5TYW1 1059 aaPredicted RBP16.28■□□□□ 0.2
COL27A1-206ENST00000490831 CEP135Q66GS9 1140 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 PHLDB3Q6NSJ2 640 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 TMEM105Q8N8V8 129 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 MMS19Q96T76 1030 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 SYT15Q9BQS2 421 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 MRPL45Q9BRJ2 306 aaKnown RBP16.28■□□□□ 0.2
COL27A1-206ENST00000490831 PI4K2AQ9BTU6 479 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 PLA2G2FQ9BZM2 168 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 ZFP14Q9HCL3 533 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 CRTAC1Q9NQ79 661 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 HOOK1Q9UJC3 728 aaKnown RBP16.28■□□□□ 0.2
COL27A1-206ENST00000490831 NME7Q9Y5B8 376 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 PCDHA5Q9Y5H7 936 aa16.28■□□□□ 0.2
COL27A1-206ENST00000490831 PHACTR2O75167 634 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 ATP2C2O75185 946 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 AOC1P19801 751 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 CYP2F1P24903 491 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 GABRR2P28476 465 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 CDC25CP30307 473 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 PRCPP42785 496 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 VAMP7P51809 220 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 CDR1P51861 262 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 STARD6P59095 220 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 RPL10AP62906 217 aaKnown RBP16.27■□□□□ 0.2
COL27A1-206ENST00000490831 TNNC1P63316 161 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 PFKPQ01813 784 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 ADAM9Q13443 819 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 BIRC3Q13489 604 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 NCOA4Q13772 614 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 MAPRE1Q15691 268 aaKnown RBP16.27■□□□□ 0.2
COL27A1-206ENST00000490831 CCDC142Q17RM4 750 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 INTS8Q75QN2 995 aaKnown RBP16.27■□□□□ 0.2
COL27A1-206ENST00000490831 SV2AQ7L0J3 742 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 SMYD4Q8IYR2 804 aaPredicted RBP16.27■□□□□ 0.2
COL27A1-206ENST00000490831 PRSS33Q8NF86 280 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 ZSCAN18Q8TBC5 510 aaPredicted RBP16.27■□□□□ 0.2
COL27A1-206ENST00000490831 E2F7Q96AV8 911 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 ARHGEF3Q9NR81 526 aa16.27■□□□□ 0.2
COL27A1-206ENST00000490831 CACNA1HO95180 2353 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 NOL4O94818 638 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 CSH1P0DML2 217 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 CSH2P0DML3 217 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 PSMC2P35998 433 aaKnown RBP16.26■□□□□ 0.19
COL27A1-206ENST00000490831 GNL1P36915 607 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-206ENST00000490831 GPR15P49685 360 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 ZNF699Q32M78 642 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 C4orf50Q6ZRC1 276 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 TMEM150AQ86TG1 271 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 SPATA2LQ8IUW3 424 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-206ENST00000490831 ZC3H3Q8IXZ2 948 aaKnown RBP16.26■□□□□ 0.19
COL27A1-206ENST00000490831 FAM186BQ8IYM0 893 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 MYCBPAPQ8TBZ2 947 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 FAM200AQ8TCP9 573 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 GIPC2Q8TF65 315 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 DEPDC1BQ8WUY9 529 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 TAF4BQ92750 862 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 SMARCE1Q969G3 411 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 TRMT2BQ96GJ1 504 aaKnown RBP16.26■□□□□ 0.19
COL27A1-206ENST00000490831 MYRFLQ96LU7 910 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 CEP295NLQ96MC4 621 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 DDX23Q9BUQ8 820 aaKnown RBP16.26■□□□□ 0.19
COL27A1-206ENST00000490831 SNX25Q9H3E2 840 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 ATXN3LQ9H3M9 355 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 ZMYM5Q9UJ78 669 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 CA14Q9ULX7 337 aa16.26■□□□□ 0.19
COL27A1-206ENST00000490831 PTPRDP23468 1912 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 NCANO14594 1321 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 SOBPA7XYQ1 873 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 ASS1P00966 412 aaKnown RBP16.25■□□□□ 0.19
COL27A1-206ENST00000490831 F11P03951 625 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 PDGFRBP09619 1106 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 PSMC3P17980 439 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 NLRP12P59046 1061 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 PSMC1P62191 440 aaKnown RBP16.25■□□□□ 0.19
COL27A1-206ENST00000490831 PRKCQQ04759 706 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 TCF15Q12870 199 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms