RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 FRMD4BQ9Y2L6 1034 aa3.34□□□□□ -1.87
UBXN4-208ENST00000490163 CTDP1Q9Y5B0 961 aaPredicted RBP3.34□□□□□ -1.87
UBXN4-208ENST00000490163 SNX8Q9Y5X2 465 aa3.34□□□□□ -1.87
UBXN4-208ENST00000490163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.34□□□□□ -1.87
UBXN4-208ENST00000490163 RNF17Q9BXT8 1623 aaKnown RBP3.34□□□□□ -1.88
UBXN4-208ENST00000490163 SAMD9LQ8IVG5 1584 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 TCRBV21S2A2A0A5A6 115 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 DYTNA2CJ06 578 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 C9orf172C9J069 976 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 ST8SIA5O15466 376 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 MMEP08473 750 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 TNFRSF8P28908 595 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 BMPR1AP36894 532 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 CTCFP49711 727 aaPredicted RBP3.34□□□□□ -1.88
UBXN4-208ENST00000490163 RPS16P62249 146 aaKnown RBP3.34□□□□□ -1.88
UBXN4-208ENST00000490163 LAPTM5Q13571 262 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 MORF4L2Q15014 288 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 CSRP2Q16527 193 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 PABPC1LQ4VXU2 614 aaKnown RBP3.34□□□□□ -1.88
UBXN4-208ENST00000490163 STEAP3Q658P3 488 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 SLFN12LQ6IEE8 588 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 MTHFD1LQ6UB35 978 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 IL27RAQ6UWB1 636 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 PGAM5Q96HS1 289 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 COL25A1Q9BXS0 654 aaPredicted RBP3.34□□□□□ -1.88
UBXN4-208ENST00000490163 ZNF341Q9BYN7 854 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 ACAD9Q9H845 621 aa3.34□□□□□ -1.88
UBXN4-208ENST00000490163 ZFP37Q9Y6Q3 630 aaPredicted RBP3.34□□□□□ -1.88
UBXN4-208ENST00000490163 SIGLEC1Q9BZZ2 1709 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 ABCC1P33527 1531 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 H0Y3Z8 333 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 CLEC2LP0C7M8 214 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 OSMP13725 252 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 FPR2P25090 351 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 APEX1P27695 318 aaKnown RBP3.33□□□□□ -1.88
UBXN4-208ENST00000490163 MAP4P27816 1152 aaKnown RBP3.33□□□□□ -1.88
UBXN4-208ENST00000490163 OAS2P29728 719 aaKnown RBP3.33□□□□□ -1.88
UBXN4-208ENST00000490163 HTR7P34969 479 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 SLC6A3Q01959 620 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 WASHC5Q12768 1159 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 PLA2G4EQ3MJ16 856 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 TTC31Q49AM3 519 aaPredicted RBP3.33□□□□□ -1.88
UBXN4-208ENST00000490163 CPZQ66K79 652 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 ITPRIPL1Q6GPH6 555 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 ABHD15Q6UXT9 468 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 ACAD11Q709F0 780 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 SH3KBP1Q96B97 665 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 ZNF668Q96K58 619 aaPredicted RBP3.33□□□□□ -1.88
UBXN4-208ENST00000490163 ERVMER34-1Q9H9K5 563 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 NAALADL1Q9UQQ1 740 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 PLEKHM1Q9Y4G2 1056 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 UNC13BO14795 1591 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 CLIP1P30622 1438 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 FMN1Q68DA7 1419 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 INO80B-WBP1J3KQ70 363 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 TNFSF14O43557 240 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 MUTP22033 750 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 SLC7A1P30825 629 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 NSUN2Q08J23 767 aaKnown RBP eCLIP3.33□□□□□ -1.88
UBXN4-208ENST00000490163 CTBP1Q13363 440 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 TRIM29Q14134 588 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 TBCCQ15814 346 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 ADIPOQQ15848 244 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 CRY2Q49AN0 593 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 GALNT18Q6P9A2 607 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 NFXL1Q6ZNB6 911 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 RHOT2Q8IXI1 618 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 CNTROBQ8N137 903 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 ARL6IP6Q8N6S5 226 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 ZNF566Q969W8 418 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 SLX1AQ9BQ83 275 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 SENP6Q9GZR1 1112 aaPredicted RBP3.33□□□□□ -1.88
UBXN4-208ENST00000490163 USP44Q9H0E7 712 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 PIDD1Q9HB75 910 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 C19orf73Q9NVV2 129 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 HECAQ9UBI9 543 aaPredicted RBP3.33□□□□□ -1.88
UBXN4-208ENST00000490163 CNPY2Q9Y2B0 182 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 WBP11Q9Y2W2 641 aaKnown RBP3.33□□□□□ -1.88
UBXN4-208ENST00000490163 ZNF711Q9Y462 761 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 USP15Q9Y4E8 981 aaPredicted RBP3.33□□□□□ -1.88
UBXN4-208ENST00000490163 PSAT1Q9Y617 370 aa3.33□□□□□ -1.88
UBXN4-208ENST00000490163 CCDC78A2IDD5 438 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 PAPSS1O43252 624 aaPredicted RBP3.32□□□□□ -1.88
UBXN4-208ENST00000490163 APPP05067 770 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 ENO2P09104 434 aaPredicted RBP3.32□□□□□ -1.88
UBXN4-208ENST00000490163 HSD17B4P51659 736 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 POU6F2P78424 691 aaPredicted RBP3.32□□□□□ -1.88
UBXN4-208ENST00000490163 CREB5Q02930 508 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 PRKCQQ04759 706 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 NOLC1Q14978 699 aaKnown RBP eCLIP3.32□□□□□ -1.88
UBXN4-208ENST00000490163 PCOLCEQ15113 449 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 TCP11X2Q5H9J9 407 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 MRNIPQ6NTE8 343 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 NHLRC1Q6VVB1 395 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 HTR3DQ70Z44 454 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 DYMQ7RTS9 669 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 PXKQ7Z7A4 578 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 DCP2Q8IU60 420 aaKnown RBP3.32□□□□□ -1.88
UBXN4-208ENST00000490163 NDUFAF2Q8N183 169 aa3.32□□□□□ -1.88
UBXN4-208ENST00000490163 CAMKK1Q8N5S9 505 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms