RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 CDK11BP21127 795 aaKnown RBP18.6■□□□□ 0.57
ERCC3-207ENST00000490062 ACAT1P24752 427 aaKnown RBP18.6■□□□□ 0.57
ERCC3-207ENST00000490062 ELF1P32519 619 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 MAGEA11P43364 429 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 RAP1GAPP47736 663 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 TUFMP49411 452 aaKnown RBP18.6■□□□□ 0.57
ERCC3-207ENST00000490062 NDST1P52848 882 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 ARPP19P56211 112 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 KCNMA1Q12791 1236 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 AAK1Q2M2I8 961 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 SLC39A12Q504Y0 691 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 PHLDB3Q6NSJ2 640 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 GPR149Q86SP6 731 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 LUZP1Q86V48 1076 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 ATXN2LQ8WWM7 1075 aaKnown RBP18.6■□□□□ 0.57
ERCC3-207ENST00000490062 ZNF707Q96C28 371 aaPredicted RBP18.6■□□□□ 0.57
ERCC3-207ENST00000490062 CEP295NLQ96MC4 621 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 ERGIC2Q96RQ1 377 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 ARID3AQ99856 593 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 NT5C1AQ9BXI3 368 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 PRKD2Q9BZL6 878 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 DNAI2Q9GZS0 605 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 SIX2Q9NPC8 291 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 PLCB1Q9NQ66 1216 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 TMLHEQ9NVH6 421 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 APEX2Q9UBZ4 518 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 GTF3C4Q9UKN8 822 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 PCDHB5Q9Y5E4 795 aa18.6■□□□□ 0.57
ERCC3-207ENST00000490062 SPTBN5Q9NRC6 3674 aaKnown RBP18.59■□□□□ 0.57
ERCC3-207ENST00000490062 SLC9A1P19634 815 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 ACO1P21399 889 aaKnown RBP18.59■□□□□ 0.57
ERCC3-207ENST00000490062 KCNA5P22460 613 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 RFX1P22670 979 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 TPM4P67936 248 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 SMAD4Q13485 552 aaKnown RBP18.59■□□□□ 0.57
ERCC3-207ENST00000490062 C4orf50Q6ZRC1 276 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 ATAD1Q8NBU5 361 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 SLC7A14Q8TBB6 771 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 CRACR2AQ9BSW2 395 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 VPS16Q9H269 839 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 CRISPLD1Q9H336 500 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 CYP4F11Q9HBI6 524 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 INSL5Q9Y5Q6 135 aa18.59■□□□□ 0.57
ERCC3-207ENST00000490062 ATP2C2O75185 946 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 SLC34A2O95436 690 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 PDGFRBP09619 1106 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 SPATA31D3P0C874 917 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 HAPLN1P10915 354 aaPredicted RBP18.58■□□□□ 0.56
ERCC3-207ENST00000490062 TRIM21P19474 475 aaKnown RBP18.58■□□□□ 0.56
ERCC3-207ENST00000490062 DUSP4Q13115 394 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 PLD1Q13393 1074 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 PPM1LQ5SGD2 360 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 FKBP15Q5T1M5 1219 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 VSTM1Q6UX27 236 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 SPATA31D4Q6ZUB0 917 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 ARHGEF19Q8IW93 802 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 PPM1KQ8N3J5 372 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.58■□□□□ 0.56
ERCC3-207ENST00000490062 PCED1BQ96HM7 432 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 KREMEN1Q96MU8 473 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 TWNKQ96RR1 684 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 DPEP3Q9H4B8 488 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 AVENQ9NQS1 362 aaPredicted RBP18.58■□□□□ 0.56
ERCC3-207ENST00000490062 PRDM6Q9NQX0 595 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 HMGXB4Q9UGU5 601 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 YIPF1Q9Y548 306 aa18.58■□□□□ 0.56
ERCC3-207ENST00000490062 A0A1B0GTH6 734 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 CCDC195A0A1B0GUA6 201 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 GOLGA6L19H0YKK7 550 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 H3BQ06 376 aaPredicted RBP18.57■□□□□ 0.56
ERCC3-207ENST00000490062 MBTPS2O43462 519 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 RFPL2O75678 378 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 CLSTN1O94985 981 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 ZNF132P52740 706 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 RAD23BP54727 409 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 PSMC1P62191 440 aaKnown RBP18.57■□□□□ 0.56
ERCC3-207ENST00000490062 LRMPQ12912 555 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 MYLPFQ96A32 169 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 NECTIN4Q96NY8 510 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 PGLYRP2Q96PD5 576 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 ELOVL4Q9GZR5 314 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 RTN4Q9NQC3 1192 aaKnown RBP18.57■□□□□ 0.56
ERCC3-207ENST00000490062 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.57■□□□□ 0.56
ERCC3-207ENST00000490062 CEP72Q9P209 647 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 SIK3Q9Y2K2 1263 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 ASB3Q9Y575 518 aa18.57■□□□□ 0.56
ERCC3-207ENST00000490062 PRRG1O14668 218 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 XYLBO75191 536 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 PAEPP09466 180 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 MTHFRP42898 656 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 MFAP3P55082 362 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 MDH1BQ5I0G3 518 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 ARHGAP17Q68EM7 881 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 CES5AQ6NT32 575 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 ACOT1Q86TX2 421 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 SPATA2LQ8IUW3 424 aaPredicted RBP18.56■□□□□ 0.56
ERCC3-207ENST00000490062 SLC4A11Q8NBS3 891 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 SHC3Q92529 594 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 KAT5Q92993 513 aa18.56■□□□□ 0.56
ERCC3-207ENST00000490062 TMEM176AQ96HP8 235 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms