RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SLC46A1Q96NT5 459 aa4.88□□□□□ -1.63
HMGN1-218ENST00000490032 MAP3K14Q99558 947 aa4.88□□□□□ -1.63
HMGN1-218ENST00000490032 SLC12A5Q9H2X9 1139 aa4.88□□□□□ -1.63
HMGN1-218ENST00000490032 ARHGEF3Q9NR81 526 aa4.88□□□□□ -1.63
HMGN1-218ENST00000490032 IP6K2Q9UHH9 426 aa4.88□□□□□ -1.63
HMGN1-218ENST00000490032 PADI4Q9UM07 663 aa4.88□□□□□ -1.63
HMGN1-218ENST00000490032 LINC01548A6NM66 108 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 PPM1DO15297 605 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 TLR5O60602 858 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 ALDH2P05091 517 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 EBLN1P0CF75 366 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 PF4V1P10720 104 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 PPIFP30405 207 aaKnown RBP4.87□□□□□ -1.63
HMGN1-218ENST00000490032 LONRF3Q496Y0 759 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 ANKRD16Q6P6B7 361 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGN1-218ENST00000490032 PLBD2Q8NHP8 589 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 CGRRF1Q99675 332 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 AASDHPPTQ9NRN7 309 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 FLRT1Q9NZU1 646 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 SERGEFQ9UGK8 458 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 SH2B3Q9UQQ2 575 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 STXBP5LQ9Y2K9 1186 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 PLEKHM1Q9Y4G2 1056 aa4.87□□□□□ -1.63
HMGN1-218ENST00000490032 TARM1B6A8C7 271 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 SLC16A3O15427 465 aaKnown RBP4.86□□□□□ -1.63
HMGN1-218ENST00000490032 UNC5CO95185 931 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 HNRNPCP07910 306 aaKnown RBP eCLIP4.86□□□□□ -1.635e-6■■■□□ 18.1
HMGN1-218ENST00000490032 CELA2AP08217 269 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 PDHA1P08559 390 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 VIPR2P41587 438 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 ABCG1P45844 678 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 KRTAP10-11P60412 298 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 SLC10A2Q12908 348 aaPredicted RBP4.86□□□□□ -1.63
HMGN1-218ENST00000490032 IQCB1Q15051 598 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 AMOTQ4VCS5 1084 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 CCDC157Q569K6 752 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 SUMO4Q6EEV6 95 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 CEP85Q6P2H3 762 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 MAVSQ7Z434 540 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 C1QL2Q7Z5L3 287 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 TBC1D5Q92609 795 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 REPS1Q96D71 796 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 MTFMTQ96DP5 389 aaKnown RBP4.86□□□□□ -1.63
HMGN1-218ENST00000490032 PTDSS2Q9BVG9 487 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 C1QTNF7Q9BXJ2 289 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 RHOBTB2Q9BYZ6 727 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 TTYH3Q9C0H2 523 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 SARS2Q9NP81 518 aaKnown RBP4.86□□□□□ -1.63
HMGN1-218ENST00000490032 PNMA8BQ9ULN7 279 aaPredicted RBP4.86□□□□□ -1.63
HMGN1-218ENST00000490032 PCDHA6Q9UN73 950 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 SSX2IPQ9Y2D8 614 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 MED16Q9Y2X0 877 aa4.86□□□□□ -1.63
HMGN1-218ENST00000490032 A0A088AWK7 358 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 ANKRD62A6NC57 917 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 ZNF213O14771 459 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 OFD1O75665 1012 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 ALDH1L1O75891 902 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 LATS1O95835 1130 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 ONECUT2O95948 504 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 FAM163BP0C2L3 166 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 NDUFB7P17568 137 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 ALDH9A1P49189 494 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 MCL1Q07820 350 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 EIF2B5Q13144 721 aaKnown RBP4.85□□□□□ -1.63
HMGN1-218ENST00000490032 LLGL1Q15334 1064 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 KHDC1LQ5JSQ8 128 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 AARS2Q5JTZ9 985 aaKnown RBP4.85□□□□□ -1.63
HMGN1-218ENST00000490032 PAPD7Q5XG87 772 aaKnown RBP4.85□□□□□ -1.63
HMGN1-218ENST00000490032 LAYNQ6UX15 382 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 WDR53Q7Z5U6 358 aaPredicted RBP4.85□□□□□ -1.63
HMGN1-218ENST00000490032 GRAMD1CQ8IYS0 662 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 DIS3LQ8TF46 1054 aaKnown RBP4.85□□□□□ -1.63
HMGN1-218ENST00000490032 STAG1Q8WVM7 1258 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 MRGPRX1Q96LB2 322 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 MOGAT1Q96PD6 335 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 DLL3Q9NYJ7 618 aa4.85□□□□□ -1.63
HMGN1-218ENST00000490032 E2F8A0AVK6 867 aa4.84□□□□□ -1.63
HMGN1-218ENST00000490032 H0YIZ8 118 aa4.84□□□□□ -1.63
HMGN1-218ENST00000490032 JTBO76095 146 aa4.84□□□□□ -1.63
HMGN1-218ENST00000490032 GRPP07492 148 aa4.84□□□□□ -1.63
HMGN1-218ENST00000490032 IL6RP08887 468 aaPredicted RBP4.84□□□□□ -1.63
HMGN1-218ENST00000490032 LIPAP38571 399 aa4.84□□□□□ -1.63
HMGN1-218ENST00000490032 PXNP49023 591 aaPredicted RBP4.84□□□□□ -1.63
HMGN1-218ENST00000490032 LILRA4P59901 499 aa4.84□□□□□ -1.63
HMGN1-218ENST00000490032 SP2Q02086 613 aa4.84□□□□□ -1.63
HMGN1-218ENST00000490032 PIN1Q13526 163 aaPredicted RBP4.84□□□□□ -1.63
HMGN1-218ENST00000490032 ZNF267Q14586 743 aaPredicted RBP4.84□□□□□ -1.63
HMGN1-218ENST00000490032 TTF1Q15361 905 aaPredicted RBP4.84□□□□□ -1.63
HMGN1-218ENST00000490032 IFIT1BQ5T764 474 aaKnown RBP4.84□□□□□ -1.63
HMGN1-218ENST00000490032 CELF5Q8N6W0 485 aaKnown RBP4.84□□□□□ -1.63
HMGN1-218ENST00000490032 PCSK9Q8NBP7 692 aaKnown RBP4.84□□□□□ -1.63
HMGN1-218ENST00000490032 DDB2Q92466 427 aa4.84□□□□□ -1.63
HMGN1-218ENST00000490032 AIFM3Q96NN9 605 aa4.84□□□□□ -1.63
HMGN1-218ENST00000490032 PUS7Q96PZ0 661 aaKnown RBP4.84□□□□□ -1.63
HMGN1-218ENST00000490032 SERTAD3Q9UJW9 196 aa4.84□□□□□ -1.63
HMGN1-218ENST00000490032 H3BML4 177 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 ERC2O15083 957 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 THP07101 528 aa4.83□□□□□ -1.64
HMGN1-218ENST00000490032 KCNJ5P48544 419 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms