RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 CTSAP10619 480 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 PTPN1P18031 435 aaKnown RBP14.2□□□□□ -0.14
TRAIP-210ENST00000489948 TSPY1Q01534 308 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 FMO1Q01740 532 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 TAP1Q03518 808 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 SMARCB1Q12824 385 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 KIAA0319Q5VV43 1072 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 SLC8B1Q6J4K2 584 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 LCLAT1Q6UWP7 414 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 ACOT1Q86TX2 421 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 MYCBPAPQ8TBZ2 947 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 ZNF606Q8WXB4 792 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 CHP1Q99653 195 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 AGPAT1Q99943 283 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 ZSWIM1Q9BR11 485 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 ZCWPW1Q9H0M4 648 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 NHEJ1Q9H9Q4 299 aaPredicted RBP14.2□□□□□ -0.14
TRAIP-210ENST00000489948 ACP6Q9NPH0 428 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 CRTAC1Q9NQ79 661 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRAIP-210ENST00000489948 MSRAQ9UJ68 235 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 NENFQ9UMX5 172 aa14.2□□□□□ -0.14
TRAIP-210ENST00000489948 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRAIP-210ENST00000489948 PLEKP08567 350 aaPredicted RBP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 SKILP12757 684 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 MYOGP15173 224 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 CD19P15391 556 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 CHRNB2P17787 502 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 ACAT1P24752 427 aaKnown RBP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 BRD2P25440 801 aaKnown RBP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 CDH5P33151 784 aaPredicted RBP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 CYLC1P35663 651 aaPredicted RBP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 EIF4A3P38919 411 aaKnown RBP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 KIF11P52732 1056 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 ORC1Q13415 861 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 CNGA2Q16280 664 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 PSMD5Q16401 504 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 SLC18A3Q16572 532 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 PPP1R2P3Q6NXS1 205 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 TAS1R1Q7RTX1 841 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 VPS52Q8N1B4 723 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 SLC30A5Q8TAD4 765 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 LNX1Q8TBB1 728 aaPredicted RBP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 SLC20A1Q8WUM9 679 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 TFAP2BQ92481 460 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 FUBP3Q96I24 572 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 CCDC42Q96M95 316 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 HEXIM2Q96MH2 286 aaKnown RBP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 HNRNPABQ99729 332 aaKnown RBP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 C17orf80Q9BSJ5 609 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 LHX5Q9H2C1 402 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 DEF6Q9H4E7 631 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 FNIP2Q9P278 1114 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 PUF60Q9UHX1 559 aaKnown RBP14.19□□□□□ -0.14
TRAIP-210ENST00000489948 IRAK3Q9Y616 596 aa14.19□□□□□ -0.14
TRAIP-210ENST00000489948 SOWAHDA6NJG2 315 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 EIF3CLB5ME19 914 aaKnown RBP14.18□□□□□ -0.14
TRAIP-210ENST00000489948 LILRB3O75022 631 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 CYP1A1P04798 512 aaPredicted RBP14.18□□□□□ -0.14
TRAIP-210ENST00000489948 MMEP08473 750 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 PDGFRBP09619 1106 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 GZMAP12544 262 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 PBX2P40425 430 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 PSMC1P62191 440 aaKnown RBP14.18□□□□□ -0.14
TRAIP-210ENST00000489948 PTPN14Q15678 1187 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 NFE2Q16621 373 aaPredicted RBP14.18□□□□□ -0.14
TRAIP-210ENST00000489948 CFAP221Q4G0U5 840 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 CTXN3Q4LDR2 81 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 PKDCCQ504Y2 493 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 CEP57Q86XR8 500 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 DCP1BQ8IZD4 617 aaKnown RBP14.18□□□□□ -0.14
TRAIP-210ENST00000489948 FUKQ8N0W3 1084 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 C12orf29Q8N999 325 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 C2orf15Q8WU43 125 aaKnown RBP14.18□□□□□ -0.14
TRAIP-210ENST00000489948 RIN2Q8WYP3 895 aaPredicted RBP14.18□□□□□ -0.14
TRAIP-210ENST00000489948 MYLPFQ96A32 169 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 B3GALT6Q96L58 329 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 EIF3CQ99613 913 aaKnown RBP14.18□□□□□ -0.14
TRAIP-210ENST00000489948 ZNF518BQ9C0D4 1074 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 RXFP1Q9HBX9 757 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 ABCB6Q9NP58 842 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 TSPAN16Q9UKR8 245 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 CEP83Q9Y592 693 aa14.18□□□□□ -0.14
TRAIP-210ENST00000489948 MYBPHLA2RUH7 354 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 H3BNC9 293 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 DDX3XO00571 662 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAIP-210ENST00000489948 FSCN2O14926 492 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 AKR1B10O60218 316 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 NDUFA10O95299 355 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 SETSIPP0DME0 302 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 UNGP13051 313 aaPredicted RBP14.17□□□□□ -0.14
TRAIP-210ENST00000489948 DNAJB2P25686 324 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 BCAT1P54687 386 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 NOMO3P69849 1222 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 CENPCQ03188 943 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 GPR17Q13304 367 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 CLEC16AQ2KHT3 1053 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 LRIT3Q3SXY7 679 aa14.17□□□□□ -0.14
TRAIP-210ENST00000489948 MDH1BQ5I0G3 518 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms