RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 CFAP221Q4G0U5 840 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 ATL3Q6DD88 541 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 WDR49Q8IV35 697 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 MFSD6LQ8IWD5 586 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 NELFCDQ8IXH7 590 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 ADGRF2Q8IZF7 708 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 TOP6BLQ8N6T0 577 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 SPATA18Q8TC71 538 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 SPPL2BQ8TCT7 592 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 ZNF512Q96ME7 567 aaPredicted RBP12.71□□□□□ -0.37
SRSF4-204ENST00000489898 CGRRF1Q99675 332 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 ACBD6Q9BR61 282 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 SMG9Q9H0W8 520 aaKnown RBP12.71□□□□□ -0.37
SRSF4-204ENST00000489898 SLC39A2Q9NP94 309 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 SIT1Q9Y3P8 196 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 ASB3Q9Y575 518 aa12.71□□□□□ -0.37
SRSF4-204ENST00000489898 A0A1B0GVL5 298 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 PVALEFA0A1B0GWK0 134 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 CLIC2O15247 247 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 VNN1O95497 513 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 STAU1O95793 577 aaKnown RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 SLFN14P0C7P3 912 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 SP9P0CG40 484 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 PSMC3P17980 439 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 LMO2P25791 158 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 RPS9P46781 194 aaKnown RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 SOX9P48436 509 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 NLRP12P59046 1061 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 MCCD1P59942 119 aaPredicted RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 ZXDBP98169 803 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 BFSP1Q12934 665 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 ZCWPW2Q504Y3 356 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 TRAPPC11Q7Z392 1133 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 ARID3BQ8IVW6 561 aaPredicted RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 C1orf210Q8IVY1 113 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 C2orf15Q8WU43 125 aaKnown RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 DEPDC1BQ8WUY9 529 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 ELMO3Q96BJ8 720 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 TRMT2BQ96GJ1 504 aaKnown RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 PAGE5Q96GU1 130 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 ZFYVE19Q96K21 471 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 MYRFLQ96LU7 910 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 SLC22A12Q96S37 553 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 SEPT5Q99719 369 aaPredicted RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 MRPL45Q9BRJ2 306 aaKnown RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 SLC46A2Q9BY10 475 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 SDCBP2Q9H190 292 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 CHRDQ9H2X0 955 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 ZFP14Q9HCL3 533 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 ABCB6Q9NP58 842 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 HPS4Q9NQG7 708 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 DDX43Q9NXZ2 648 aaKnown RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 ABI2Q9NYB9 513 aaPredicted RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 SNX9Q9Y5X1 595 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 R4GN57 208 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 SPEGQ15772 3267 aa12.7□□□□□ -0.38
SRSF4-204ENST00000489898 PTPRZ1P23471 2315 aaPredicted RBP12.7□□□□□ -0.38
SRSF4-204ENST00000489898 NUP205Q92621 2012 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 LRRIQ3A6PVS8 624 aaPredicted RBP12.69□□□□□ -0.38
SRSF4-204ENST00000489898 CHRNB1P11230 501 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 WARSP23381 471 aaKnown RBP12.69□□□□□ -0.38
SRSF4-204ENST00000489898 CYP2F1P24903 491 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 GDI1P31150 447 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 AFMP43652 599 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 ME1P48163 572 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 NDUFA8P51970 172 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 EPHB3P54753 998 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 USP46P62068 366 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 PSMC1P62191 440 aaKnown RBP12.69□□□□□ -0.38
SRSF4-204ENST00000489898 PFKPQ01813 784 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 USP4Q13107 963 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 MGAT5BQ3V5L5 792 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 KMT5BQ4FZB7 885 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 CYP4A22Q5TCH4 519 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 TDRD10Q5VZ19 366 aaKnown RBP12.69□□□□□ -0.38
SRSF4-204ENST00000489898 IQCEQ6IPM2 695 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 GPIHBP1Q8IV16 184 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 SYCP3Q8IZU3 236 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 TMEM86AQ8N2M4 240 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 SUMF1Q8NBK3 374 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 GIPC2Q8TF65 315 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 EZH1Q92800 747 aaPredicted RBP12.69□□□□□ -0.38
SRSF4-204ENST00000489898 MYLPFQ96A32 169 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 PI4K2AQ9BTU6 479 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 DPEP3Q9H4B8 488 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 VRTNQ9H8Y1 702 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 GTF3C4Q9UKN8 822 aa12.69□□□□□ -0.38
SRSF4-204ENST00000489898 ZNF233A6NK53 670 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 CHADO15335 359 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 LILRB5O75023 590 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 TMEM191BP0C7N4 346 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 CMA1P23946 247 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 ALDH1A3P47895 512 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 CYP2J2P51589 502 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 DLG4P78352 724 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 TNK2Q07912 1038 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 DPYDQ12882 1025 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 UBXN2BQ14CS0 331 aa12.68□□□□□ -0.38
SRSF4-204ENST00000489898 GAB4Q2WGN9 574 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms