RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 RCOR2Q8IZ40 523 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 TMEM109Q9BVC6 243 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 SDCBP2Q9H190 292 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 TPX2Q9ULW0 747 aaKnown RBP16.55■□□□□ 0.24
BRD9-208ENST00000489816 PHIPQ8WWQ0 1821 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 RLFQ13129 1914 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 SRRM3A6NNA2 597 aaPredicted RBP16.55■□□□□ 0.24
BRD9-208ENST00000489816 CDH16O75309 829 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 VTNP04004 478 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 WDR4P57081 412 aaKnown RBP16.55■□□□□ 0.24
BRD9-208ENST00000489816 NEDD9Q14511 834 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 SGSM1Q2NKQ1 1148 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 MSS51Q4VC12 460 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 METTL7BQ6UX53 244 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 FAM71DQ8N9W8 422 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 DNERQ8NFT8 737 aa16.55■□□□□ 0.24
BRD9-208ENST00000489816 GPR25O00155 361 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 ASAP2O43150 1006 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 MAN1A1P33908 653 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 ASPAP45381 313 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 RGS7P49802 495 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 TFDP3Q5H9I0 405 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 ARMC9Q7Z3E5 817 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 FAM228AQ86W67 206 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 WDR49Q8IV35 697 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 CHST13Q8NET6 341 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 PIWIL1Q96J94 861 aaKnown RBP16.54■□□□□ 0.24
BRD9-208ENST00000489816 CCDC77Q9BR77 488 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 USP15Q9Y4E8 981 aaPredicted RBP16.54■□□□□ 0.24
BRD9-208ENST00000489816 CEP83Q9Y592 693 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 CSADQ9Y600 493 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 MCM3APO60318 1980 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 hCG_1818297A0A087WSY0 165 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 ZBTB42B2RXF5 422 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 ATP2A1O14983 1001 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 CDKN2BP42772 138 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 ATP11AP98196 1134 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 TMEM62Q0P6H9 643 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 SMAD1Q15797 465 aaKnown RBP16.54■□□□□ 0.24
BRD9-208ENST00000489816 BBS9Q3SYG4 887 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 PARP9Q8IXQ6 854 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 C12orf29Q8N999 325 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 XYLT2Q9H1B5 865 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 GINM1Q9NU53 330 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 CPSF3Q9UKF6 684 aaKnown RBP16.54■□□□□ 0.24
BRD9-208ENST00000489816 A8MUI8 341 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 LRCH4O75427 683 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 TXNP10599 105 aaKnown RBP16.54■□□□□ 0.24
BRD9-208ENST00000489816 ZNF132P52740 706 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 BASP1P80723 227 aaKnown RBP16.54■□□□□ 0.24
BRD9-208ENST00000489816 TFDP1Q14186 410 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 SCYL2Q6P3W7 929 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 GPATCH11Q8N954 259 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 CCDC63Q8NA47 563 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 PRCCQ92733 491 aaPredicted RBP16.54■□□□□ 0.24
BRD9-208ENST00000489816 RBM41Q96IZ5 413 aaKnown RBP16.54■□□□□ 0.24
BRD9-208ENST00000489816 GPR20Q99678 358 aa16.54■□□□□ 0.24
BRD9-208ENST00000489816 NSRP1Q9H0G5 558 aaKnown RBP16.54■□□□□ 0.24
BRD9-208ENST00000489816 ACTR5Q9H9F9 607 aaPredicted RBP16.54■□□□□ 0.24
BRD9-208ENST00000489816 IGKV6D-21A0A0A0MT36 114 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 F5H423 210 aaPredicted RBP16.53■□□□□ 0.24
BRD9-208ENST00000489816 DNALI1O14645 258 aaPredicted RBP16.53■□□□□ 0.24
BRD9-208ENST00000489816 PIGRP01833 764 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 TNNC2P02585 160 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 CALB1P05937 261 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 CA4P22748 312 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 ICAM3P32942 547 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 RPA3P35244 121 aaPredicted RBP16.53■□□□□ 0.24
BRD9-208ENST00000489816 FAXCQ5TGI0 409 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 UNC45BQ8IWX7 931 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 FITM2Q8N6M3 262 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 KCTD6Q8NC69 237 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 SLC16A10Q8TF71 515 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 VCPIP1Q96JH7 1222 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 PITPNM3Q9BZ71 974 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 CXCL16Q9H2A7 254 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 GPATCH2LQ9NWQ4 482 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 A0A087WZ62 844 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 ERBB2P04626 1255 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 GCAP28676 217 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 RFC5P40937 340 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 CTCFP49711 727 aaPredicted RBP16.53■□□□□ 0.24
BRD9-208ENST00000489816 PLCB4Q15147 1175 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 C15orf59Q2T9L4 293 aaPredicted RBP16.53■□□□□ 0.24
BRD9-208ENST00000489816 FNBP1LQ5T0N5 605 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 RFX6Q8HWS3 928 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 ALLCQ8N6M5 410 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 C3orf20Q8ND61 904 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 HEXIM2Q96MH2 286 aaKnown RBP16.53■□□□□ 0.24
BRD9-208ENST00000489816 LPIN3Q9BQK8 851 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 FDXACB1Q9BRP7 624 aaPredicted RBP16.53■□□□□ 0.24
BRD9-208ENST00000489816 TMEM134Q9H6X4 195 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 GGA2Q9UJY4 613 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 L3MBTL1Q9Y468 752 aa16.53■□□□□ 0.24
BRD9-208ENST00000489816 ATXN2Q99700 1313 aaKnown RBP16.53■□□□□ 0.24
BRD9-208ENST00000489816 LACTBL1A8MY62 500 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 MCCD1P59942 119 aaPredicted RBP16.52■□□□□ 0.24
BRD9-208ENST00000489816 ZNF667Q5HYK9 610 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 ZPBP2Q6X784 338 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 SPATA21Q7Z572 469 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms