RNA–Protein interactions for RNA: ENST00000489710.1

ERI3-208, Transcript of ERI1 exoribonuclease family member 3, human

TSL 3

Gene ERI3, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERI3-208	ENST00000489710	TNFRSF10A	O00220	468 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	P4HA2	O15460	535 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	AFP	P02771	609 aa	Known RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	PDGFRB	P09619	1106 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	HAPLN1	P10915	354 aa	Predicted RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	PTPN2	P17706	415 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	FSHR	P23945	695 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	LMO2	P25791	158 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	ASPA	P45381	313 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	RAP1GAP	P47736	663 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	FMO5	P49326	533 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	CDH8	P55286	799 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	PSMC1	P62191	440 aa	Known RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	VEPH1	Q14D04	833 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	STX1A	Q16623	288 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	CFAP221	Q4G0U5	840 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	PABPC1L	Q4VXU2	614 aa	Known RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	SPOPL	Q6IQ16	392 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	FAM171B	Q6P995	826 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	ITIH5	Q86UX2	942 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	UNC93A	Q86WB7	457 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	FAM114A1	Q8IWE2	563 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	ZDHHC14	Q8IZN3	488 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	PLCD3	Q8N3E9	789 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	MYCBPAP	Q8TBZ2	947 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	SEMA4D	Q92854	862 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	TNIP3	Q96KP6	325 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	CNOT6L	Q96LI5	555 aa	Known RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	MED15	Q96RN5	788 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	BCO2	Q9BYV7	579 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	APOBEC3G	Q9HC16	384 aa	Known RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	TMLHE	Q9NVH6	421 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.44	□□□□□ -0.74	6e-10	■■□□□ 13.9
ERI3-208	ENST00000489710	DNMT3B	Q9UBC3	853 aa	Known RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	GTF3C4	Q9UKN8	822 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	SLC27A5	Q9Y2P5	690 aa		10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.44	□□□□□ -0.74
ERI3-208	ENST00000489710	C2CD4D	B7Z1M9	353 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	DLL1	O00548	723 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	ZNF197	O14709	1029 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	HCRT	O43612	131 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	ATP2C2	O75185	946 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	RHO	P08100	348 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	PTPN1	P18031	435 aa	Known RBP	10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	SP100	P23497	879 aa	Predicted RBP	10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	MAGEA11	P43364	429 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	RPL10A	P62906	217 aa	Known RBP	10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	CYP27A1	Q02318	531 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	INCA1	Q0VD86	236 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	KCNH2	Q12809	1159 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	KLHL40	Q2TBA0	621 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	CYP4A22	Q5TCH4	519 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	CAVIN1	Q6NZI2	390 aa	Known RBP	10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	PDZD4	Q76G19	769 aa	Predicted RBP	10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	GET4	Q7L5D6	327 aa	Predicted RBP	10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	TTC9B	Q8N6N2	239 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	B3GALNT2	Q8NCR0	500 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	FAM200A	Q8TCP9	573 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	PSMG2	Q969U7	264 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	MYLPF	Q96A32	169 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	ELMO3	Q96BJ8	720 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	CORO1B	Q9BR76	489 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	SDCBP2	Q9H190	292 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	CRTAC1	Q9NQ79	661 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	ASAH2	Q9NR71	780 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	HCFC1R1	Q9NWW0	138 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	TMEM63C	Q9P1W3	806 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	CEP72	Q9P209	647 aa		10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	MRPS23	Q9Y3D9	190 aa	Known RBP	10.43	□□□□□ -0.74
ERI3-208	ENST00000489710	ATP8B3	O60423	1300 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	SOAT2	O75908	522 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	MICAL2	O94851	1124 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	LETM1	O95202	739 aa	Predicted RBP	10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	FGF19	O95750	216 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	TBXAS1	P24557	533 aa	Predicted RBP	10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	CYP2F1	P24903	491 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	GBP2	P32456	591 aa	Predicted RBP	10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	MTIF2	P46199	727 aa	Known RBP	10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	NDST1	P52848	882 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	EPHA5	P54756	1037 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	YWHAE	P62258	255 aa	Known RBP	10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	NTHL1	P78549	312 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	TAF12	Q16514	161 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	MDH1B	Q5I0G3	518 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	VSTM1	Q6UX27	236 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	IRF2BP1	Q8IU81	584 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	RNF135	Q8IUD6	432 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	CREBRF	Q8IUR6	639 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	ENOX1	Q8TC92	643 aa	Known RBP	10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	PCED1B	Q96HM7	432 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	CEP295NL	Q96MC4	621 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	ELOVL4	Q9GZR5	314 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	DNAJC25	Q9H1X3	360 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	DPEP3	Q9H4B8	488 aa		10.42	□□□□□ -0.74
ERI3-208	ENST00000489710	CD320	Q9NPF0	282 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms