RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 C2orf71A6NGG8 1288 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 LILRB3O75022 631 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 ATP2C2O75185 946 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 CNPP09543 421 aaKnown RBP15.16■□□□□ 0.02
CLDN11-209ENST00000489485 SOX5P35711 763 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 RAD23BP54727 409 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 CREMQ03060 361 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 PTPROQ16827 1216 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 PDE12Q6L8Q7 609 aaKnown RBP15.16■□□□□ 0.02
CLDN11-209ENST00000489485 LRRC8AQ8IWT6 810 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 GPR65Q8IYL9 337 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 TMEM176AQ96HP8 235 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 EMILIN2Q9BXX0 1053 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 OXCT2Q9BYC2 517 aaPredicted RBP15.16■□□□□ 0.02
CLDN11-209ENST00000489485 ELOVL4Q9GZR5 314 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 NUCKS1Q9H1E3 243 aaKnown RBP15.16■□□□□ 0.02
CLDN11-209ENST00000489485 GTF3C4Q9UKN8 822 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 CDH9Q9ULB4 789 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 OR6C75A6NL08 312 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 FSCN2O14926 492 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 TEX28O15482 410 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 CYP26A1O43174 497 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 ADAM12O43184 909 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 TBC1D4O60343 1298 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 PTPN1P18031 435 aaKnown RBP15.16■□□□□ 0.02
CLDN11-209ENST00000489485 SLC39A12Q504Y0 691 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 INTS6LQ5JSJ4 861 aaKnown RBP15.16■□□□□ 0.02
CLDN11-209ENST00000489485 SLC8B1Q6J4K2 584 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 WDR59Q6PJI9 974 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 C12orf29Q8N999 325 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 SLC4A11Q8NBS3 891 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 B3GALNT2Q8NCR0 500 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 MRPL38Q96DV4 380 aaKnown RBP15.16■□□□□ 0.02
CLDN11-209ENST00000489485 HEXIM2Q96MH2 286 aaKnown RBP15.16■□□□□ 0.02
CLDN11-209ENST00000489485 ZNF830Q96NB3 372 aaPredicted RBP15.16■□□□□ 0.02
CLDN11-209ENST00000489485 PANX2Q96RD6 677 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 LPIN3Q9BQK8 851 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 ACP6Q9NPH0 428 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 FNIP2Q9P278 1114 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 MYO6Q9UM54 1294 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 ATG2AQ2TAZ0 1938 aa15.16■□□□□ 0.02
CLDN11-209ENST00000489485 MYBPHLA2RUH7 354 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 ADH1AP07327 375 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 SKILP12757 684 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 CD19P15391 556 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 KLRC2P26717 231 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 NDUFV1P49821 464 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 ROR1Q01973 937 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 CCDC142Q17RM4 750 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 MDH1BQ5I0G3 518 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 RBM23Q86U06 439 aaKnown RBP15.15■□□□□ 0.02
CLDN11-209ENST00000489485 LRRTM3Q86VH5 581 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 PALB2Q86YC2 1186 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 FAM71AQ8IYT1 594 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 DCP1BQ8IZD4 617 aaKnown RBP15.15■□□□□ 0.02
CLDN11-209ENST00000489485 PGLYRP2Q96PD5 576 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 ZCWPW1Q9H0M4 648 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 RXFP1Q9HBX9 757 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 ZNHIT6Q9NWK9 470 aaKnown RBP15.15■□□□□ 0.02
CLDN11-209ENST00000489485 AIPL1Q9NZN9 384 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 CNTN6Q9UQ52 1028 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 PRRC2BQ5JSZ5 2229 aaKnown RBP15.15■□□□□ 0.02
CLDN11-209ENST00000489485 MYH10P35580 1976 aa15.15■□□□□ 0.02
CLDN11-209ENST00000489485 CLCN1P35523 988 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 CYP27A1Q02318 531 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 ASIC2Q16515 512 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 IRF2BP2Q7Z5L9 587 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 CRYBG2Q8N1P7 616 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 SYN2Q92777 582 aaPredicted RBP15.14■□□□□ 0.01
CLDN11-209ENST00000489485 KLHL5Q96PQ7 755 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 CRTAC1Q9NQ79 661 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 FAM49BQ9NUQ9 324 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 WDR27A2RRH5 827 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 PER2O15055 1255 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 CALCAP01258 141 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 PLEKP08567 350 aaPredicted RBP15.14■□□□□ 0.01
CLDN11-209ENST00000489485 PAEPP09466 180 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 GNA15P30679 374 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 HNRNPH3P31942 346 aaKnown RBP15.14■□□□□ 0.01
CLDN11-209ENST00000489485 ZNF132P52740 706 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 PTK2Q05397 1052 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 GPR17Q13304 367 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 MAPRE1Q15691 268 aaKnown RBP15.14■□□□□ 0.01
CLDN11-209ENST00000489485 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 MYCBPAPQ8TBZ2 947 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 CYFIP2Q96F07 1278 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 PCED1BQ96HM7 432 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 CHP1Q99653 195 aa15.14■□□□□ 0.01
CLDN11-209ENST00000489485 BAG1Q99933 345 aaPredicted RBP15.14■□□□□ 0.01
CLDN11-209ENST00000489485 FERP16591 822 aa15.13■□□□□ 0.01
CLDN11-209ENST00000489485 IGFBP4P22692 258 aa15.13■□□□□ 0.01
CLDN11-209ENST00000489485 KLHL30Q0D2K2 578 aa15.13■□□□□ 0.01
CLDN11-209ENST00000489485 SGO2Q562F6 1265 aa15.13■□□□□ 0.01
CLDN11-209ENST00000489485 TDRD12Q587J7 1177 aaKnown RBP15.13■□□□□ 0.01
CLDN11-209ENST00000489485 HGSNATQ68CP4 663 aa15.13■□□□□ 0.01
CLDN11-209ENST00000489485 FAM171BQ6P995 826 aa15.13■□□□□ 0.01
CLDN11-209ENST00000489485 RNF19BQ6ZMZ0 732 aa15.13■□□□□ 0.01
CLDN11-209ENST00000489485 Q7L0L9 218 aa15.13■□□□□ 0.01
CLDN11-209ENST00000489485 ZNF461Q8TAF7 563 aa15.13■□□□□ 0.01
CLDN11-209ENST00000489485 HAUS4Q9H6D7 363 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms