RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 TMEM8AQ9HCN3 771 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 KCNK9Q9NPC2 374 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 RNF14Q9UBS8 474 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 GOLGA6L10A0A0M3HER8 536 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 SOWAHBA6NEL2 793 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 USP2O75604 605 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 PENKP01210 267 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 HNRNPCP07910 306 aaKnown RBP eCLIP8.05□□□□□ -1.12
BEST3-205ENST00000488961 PMS2P54278 862 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 RAD23BP54727 409 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 NOP14P78316 857 aaKnown RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 MCL1Q07820 350 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 FASTKD3Q14CZ7 662 aaKnown RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 FOXR2Q6PJQ5 311 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 CCDC80Q76M96 950 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 SLC15A3Q8IY34 581 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 ARFGAP2Q8N6H7 521 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 UBL4BQ8N7F7 174 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 REPS2Q8NFH8 660 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 APOL6Q9BWW8 343 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 OXCT2Q9BYC2 517 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 GRHL1Q9NZI5 618 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 CACNG4Q9UBN1 327 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 TMCO1Q9UM00 188 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 BARX2Q9UMQ3 279 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 WDR37Q9Y2I8 494 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 GSTTP1A0A1W2PQM5 241 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 SPAG7O75391 227 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 GSTA1P08263 222 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 IQCF3P0C7M6 154 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 SUPT20HL2P0C7V6 817 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 CXCL8P10145 99 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 ATP6V1C1P21283 382 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 HSPA9P38646 679 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 ADCY8P40145 1251 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 PTGIRP43119 386 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 NSFP46459 744 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 JAK3P52333 1124 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 PTENP60484 403 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 CDR2Q01850 454 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 POU5F1Q01860 360 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 RNASELQ05823 741 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 STXBP2Q15833 593 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 SUPT20HL1Q3ZLR7 823 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 WDR44Q5JSH3 913 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 SH3PXD2AQ5TCZ1 1133 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 CATSPERGQ6ZRH7 1159 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 NANOGNBQ7Z5D8 188 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 SLC13A5Q86YT5 568 aaPredicted RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 ANKMY2Q8IV38 441 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 SULF1Q8IWU6 871 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 ATP11CQ8NB49 1132 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 RBBP8NLQ8NC74 664 aaPredicted RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 SLC7A3Q8WY07 619 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 ATP6V0A1Q93050 837 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 IWS1Q96ST2 819 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 PRMT1Q99873 361 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 ASCC2Q9H1I8 757 aaPredicted RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 CARD9Q9H257 536 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 UBAP1Q9NZ09 502 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 PAIP2BQ9ULR5 123 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 HES2Q9Y543 173 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 KIF13BQ9NQT8 1826 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 NOP56O00567 594 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 TLR3O15455 904 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 TMCC1O94876 653 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 F7P08709 466 aaPredicted RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 CD48P09326 243 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 CHN1P15882 459 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 COILP38432 576 aaPredicted RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 MSH2P43246 934 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 CCNG1P51959 295 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 GLRA4Q5JXX5 417 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 DUS1LQ6P1R4 473 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 FAM47EQ6ZV65 393 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 CYP4X1Q8N118 509 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 RASGEF1CQ8N431 466 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.04□□□□□ -1.12
BEST3-205ENST00000488961 UBA3Q8TBC4 463 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 TFAP2BQ92481 460 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 KLHL29Q96CT2 875 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 CLIP3Q96DZ5 547 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 KLF6Q99612 283 aaPredicted RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 TRAIPQ9BWF2 469 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 PORCNQ9H237 461 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 INIPQ9NRY2 104 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 ZDHHC18Q9NUE0 388 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 ETNK2Q9NVF9 386 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 LRRC42Q9Y546 428 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 NCANO14594 1321 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 SYNGAP1Q96PV0 1343 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 CETPP11597 493 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 TNFRSF8P28908 595 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 STAT5BP51692 787 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 CLCN2P51788 898 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 ITGA8P53708 1063 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 LACTBP83111 547 aaPredicted RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 ATP11AP98196 1134 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 OGDHQ02218 1023 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 NCOA4Q13772 614 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms