RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	SLFN14	P0C7P3	912 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	PFKFB1	P16118	471 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	HMGA1	P17096	107 aa	Known RBP	18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	CYP2F1	P24903	491 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	TSPY1	Q01534	308 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	SURF1	Q15526	300 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	DUOXA2	Q1HG44	320 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	BMT2	Q1RMZ1	405 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	INTS6L	Q5JSJ4	861 aa	Known RBP	18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	LIMS2	Q7Z4I7	341 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	TMEM150A	Q86TG1	271 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	ADGRF2	Q8IZF7	708 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	ZNF687	Q8N1G0	1237 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	TMEM86A	Q8N2M4	240 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	TOP6BL	Q8N6T0	577 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	ZNF516	Q92618	1163 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	CCDC127	Q96BQ5	260 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	HPDL	Q96IR7	371 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628		R4GN57	208 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	GVINP1	Q7Z2Y8	2422 aa		18.35	■□□□□ 0.53
SUN1-233	ENST00000488628	MYBPHL	A2RUH7	354 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	PRPF40A	O75400	957 aa	Known RBP	18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	PRAMEF12	O95522	483 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	TNNC2	P02585	160 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	SP9	P0CG40	484 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	DLAT	P10515	647 aa	Known RBP	18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	LMO2	P25791	158 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	CYP24A1	Q07973	514 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	SMARCB1	Q12824	385 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	STK4	Q13043	487 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	VEPH1	Q14D04	833 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	DDR2	Q16832	855 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	TRAPPC11	Q7Z392	1133 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	WDR49	Q8IV35	697 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	CEP57L1	Q8IYX8	460 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	XXYLT1	Q8NBI6	393 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	KIAA0895	Q8NCT3	520 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	DEPDC1B	Q8WUY9	529 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	KBTBD7	Q8WVZ9	684 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	IRF7	Q92985	503 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	SLC46A2	Q9BY10	475 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	OSBPL6	Q9BZF3	934 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	SMG9	Q9H0W8	520 aa	Known RBP	18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	KIAA1586	Q9HCI6	787 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	HPSE	Q9Y251	543 aa		18.34	■□□□□ 0.53
SUN1-233	ENST00000488628	ZNF263	O14978	683 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	CMA1	P23946	247 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	MYL7	Q01449	175 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	PSMD6	Q15008	389 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	KNOP1	Q1ED39	458 aa	Known RBP	18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	ZNF852	Q6ZMS4	543 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	PLEKHO2	Q8TD55	490 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	NKD2	Q969F2	451 aa	Predicted RBP	18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	CLDN23	Q96B33	292 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	ZFYVE19	Q96K21	471 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	SPATA32	Q96LK8	384 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	CGRRF1	Q99675	332 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	BCO2	Q9BYV7	579 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	TASP1	Q9H6P5	420 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	TRPV5	Q9NQA5	729 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	SPATA6	Q9NWH7	488 aa	Predicted RBP	18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	NDRG2	Q9UN36	371 aa	Known RBP	18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	NME7	Q9Y5B8	376 aa		18.33	■□□□□ 0.52
SUN1-233	ENST00000488628	FGF19	O95750	216 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	F11	P03951	625 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	TNNI1	P19237	187 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	LHX1	P48742	406 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	CASP4	P49662	377 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	NLRP12	P59046	1061 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	PSMC1	P62191	440 aa	Known RBP	18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	FCHO2	Q0JRZ9	810 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	MYO1E	Q12965	1108 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	TAF12	Q16514	161 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	NFE2	Q16621	373 aa	Predicted RBP	18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	KMT5B	Q4FZB7	885 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	ARHGAP15	Q53QZ3	475 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	FAM171B	Q6P995	826 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	HS2ST1	Q7LGA3	356 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	C12orf56	Q8IXR9	622 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	TTC8	Q8TAM2	541 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	E2F7	Q96AV8	911 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	CRTAC1	Q9NQ79	661 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	PIAS3	Q9Y6X2	628 aa		18.32	■□□□□ 0.52
SUN1-233	ENST00000488628	ATG2B	Q96BY7	2078 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	CHAD	O15335	359 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	PDGFRB	P09619	1106 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	CDC25C	P30307	473 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	SOX9	P48436	509 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	SNRPF	P62306	86 aa	Known RBP	18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	KRT85	P78386	507 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	YAF2	Q8IY57	180 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	SPATA18	Q8TC71	538 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	FNBP1	Q96RU3	617 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	NELL2	Q99435	816 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	MRPL45	Q9BRJ2	306 aa	Known RBP	18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	R3HCC1	Q9Y3T6	440 aa	Known RBP	18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	GPR179	Q6PRD1	2367 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	OTOGL	Q3ZCN5	2332 aa		18.31	■□□□□ 0.52
SUN1-233	ENST00000488628	SLC38A8	A6NNN8	435 aa		18.3	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms