RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 LPIN3Q9BQK8 851 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 GTPBP4Q9BZE4 634 aaKnown RBP17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 ABCB6Q9NP58 842 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 CRTAC1Q9NQ79 661 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 ASAH2Q9NR71 780 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 ABI2Q9NYB9 513 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 RAPGEFL1Q9UHV5 662 aa17.08■□□□□ 0.32
CTDSP1-209ENST00000488627 PDGFRBP09619 1106 aa17.07■□□□□ 0.32
CTDSP1-209ENST00000488627 MYL4P12829 197 aa17.07■□□□□ 0.32
CTDSP1-209ENST00000488627 GJA1P17302 382 aa17.07■□□□□ 0.32
CTDSP1-209ENST00000488627 GPR15P49685 360 aa17.07■□□□□ 0.32
CTDSP1-209ENST00000488627 PI4K2AQ9BTU6 479 aa17.07■□□□□ 0.32
CTDSP1-209ENST00000488627 MKNK1Q9BUB5 465 aa17.07■□□□□ 0.32
CTDSP1-209ENST00000488627 IL21Q9HBE4 155 aa17.07■□□□□ 0.32
CTDSP1-209ENST00000488627 NXF1Q9UBU9 619 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-209ENST00000488627 CDH9Q9ULB4 789 aa17.07■□□□□ 0.32
CTDSP1-209ENST00000488627 TSC2P49815 1807 aa17.07■□□□□ 0.32
CTDSP1-209ENST00000488627 PPP1R3GB7ZBB8 358 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 TRIM49P0CI25 452 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 TRIM49CP0CI26 452 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 SRFP11831 508 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 HMGA1P17096 107 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 FCARP24071 287 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 CYP2F1P24903 491 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 GNL1P36915 607 aaPredicted RBP17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 GCLMP48507 274 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 PSMC1P62191 440 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 TNNC1P63316 161 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 MORC3Q14149 939 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 TEAD2Q15562 447 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 SGSM1Q2NKQ1 1148 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 ZNF699Q32M78 642 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 CFAP221Q4G0U5 840 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 FAM78AQ5JUQ0 283 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 GIPC2Q8TF65 315 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 SYT15Q9BQS2 421 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 PLA2G2FQ9BZM2 168 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 SDCBP2Q9H190 292 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 SMYD3Q9H7B4 428 aa17.06■□□□□ 0.32
CTDSP1-209ENST00000488627 A0A1W2PRU2 124 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 TRIM49BA6NDI0 452 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 CETN3O15182 167 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 ASS1P00966 412 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 HLA-DRAP01903 254 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 KRT13P13646 458 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 CCNE1P24864 410 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 CDH8P55286 799 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 FKBP3Q00688 224 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 ZNF667Q5HYK9 610 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 TANGO2Q6ICL3 276 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 MTSS1LQ765P7 747 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 ITIH5Q86UX2 942 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 FBXL6Q8N531 539 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 OR6B3Q8NGW1 331 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 GPR152Q8TDT2 470 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 DHTKD1Q96HY7 919 aaPredicted RBP17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 FUBP3Q96I24 572 aaKnown RBP eCLIP17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 ASB16Q96NS5 453 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 KXD1Q9BQD3 176 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 SLC2A4RGQ9NR83 387 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 WNT16Q9UBV4 365 aa17.05■□□□□ 0.32
CTDSP1-209ENST00000488627 LRRN2O75325 713 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 ECI2O75521 394 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 GTF2H1P32780 548 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 MAGEA11P43364 429 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 GPC5P78333 572 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 LRRC63Q05C16 580 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 DDR2Q16832 855 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 SDHAF4Q5VUM1 108 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 SPOPLQ6IQ16 392 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 TMEM150AQ86TG1 271 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 SPATA2LQ8IUW3 424 aaPredicted RBP17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 MYCBPAPQ8TBZ2 947 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 TAS1R2Q8TE23 839 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 TAF4BQ92750 862 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 PCED1BQ96HM7 432 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 DUSP9Q99956 384 aaKnown RBP17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 SNX25Q9H3E2 840 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 DPEP3Q9H4B8 488 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 TRPV4Q9HBA0 871 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 APOBEC3GQ9HC16 384 aaKnown RBP17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 TMEM8AQ9HCN3 771 aa17.04■□□□□ 0.32
CTDSP1-209ENST00000488627 KRBA1A5PL33 1030 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 BIN1O00499 593 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 PSMA7O14818 248 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 CFHP08603 1231 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 EPB41P11171 864 aaKnown RBP17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 NPR3P17342 541 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 PTPN1P18031 435 aaKnown RBP17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 GABRR2P28476 465 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 RAP1GAPP47736 663 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 RPL10AP62906 217 aaKnown RBP17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 VEPH1Q14D04 833 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 STXBP5Q5T5C0 1151 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 TTI2Q6NXR4 508 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 STKLD1Q8NE28 680 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 FAM200AQ8TCP9 573 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 SMARCD2Q92925 531 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 MYLPFQ96A32 169 aa17.03■□□□□ 0.32
CTDSP1-209ENST00000488627 ELSPBP1Q96BH3 223 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms