RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 GNL3LQ9NVN8 582 aaKnown RBP4.04□□□□□ -1.76
CD46-215ENST00000488596 TBCCD1Q9NVR7 557 aa4.04□□□□□ -1.76
CD46-215ENST00000488596 MRPS18AQ9NVS2 196 aaKnown RBP4.04□□□□□ -1.76
CD46-215ENST00000488596 FAM30AQ9NZY2 134 aa4.04□□□□□ -1.76
CD46-215ENST00000488596 JKAMPQ9P055 326 aa4.04□□□□□ -1.76
CD46-215ENST00000488596 CPNE7Q9UBL6 633 aa4.04□□□□□ -1.76
CD46-215ENST00000488596 AGAP1Q9UPQ3 857 aa4.04□□□□□ -1.76
CD46-215ENST00000488596 ZNF785A8K8V0 405 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 TBX3O15119 743 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 MGEA5O60502 916 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 PEX14O75381 377 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 CKBP12277 381 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 MYF5P13349 255 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 PHKG2P15735 406 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 GCSHP23434 173 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 ABCG1P45844 678 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 HSD11B2P80365 405 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 MRPS35P82673 323 aaKnown RBP4.03□□□□□ -1.76
CD46-215ENST00000488596 PICALMQ13492 652 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 UBE4AQ14139 1066 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 KIF22Q14807 665 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 CYP2A13Q16696 494 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 ZNF365Q70YC5 407 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 USP37Q86T82 979 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 SKAP1Q86WV1 359 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 SCARB1Q8WTV0 552 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 AIFM2Q9BRQ8 373 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 TLR10Q9BXR5 811 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 RNPEPQ9H4A4 650 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 UNKLQ9H9P5 680 aaKnown RBP4.03□□□□□ -1.76
CD46-215ENST00000488596 GALNT9Q9HCQ5 603 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 IL17RBQ9NRM6 502 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.03□□□□□ -1.76
CD46-215ENST00000488596 PIH1D1Q9NWS0 290 aaKnown RBP4.03□□□□□ -1.76
CD46-215ENST00000488596 VSX1Q9NZR4 365 aaPredicted RBP4.03□□□□□ -1.76
CD46-215ENST00000488596 CFAP97Q9P2B7 532 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 LRIT1Q9P2V4 623 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 ZDHHC8Q9ULC8 765 aa4.03□□□□□ -1.76
CD46-215ENST00000488596 SETD1BQ9UPS6 1966 aaKnown RBP4.02□□□□□ -1.77
CD46-215ENST00000488596 ANO9A1A5B4 782 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 E9PLN8 166 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 MYO1FO00160 1098 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 VPS4BO75351 444 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 GPANK1O95872 356 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 BRAFP15056 766 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 ZKSCAN1P17029 563 aaPredicted RBP4.02□□□□□ -1.77
CD46-215ENST00000488596 CTGFP29279 349 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 PIK3CBP42338 1070 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 ZNF135P52742 658 aaPredicted RBP4.02□□□□□ -1.77
CD46-215ENST00000488596 RHBDL3P58872 404 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 FMO1Q01740 532 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 SLFN5Q08AF3 891 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 POLD3Q15054 466 aaPredicted RBP4.02□□□□□ -1.77
CD46-215ENST00000488596 CNGA2Q16280 664 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 MICALCLQ6ZW33 695 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 AOPEPQ8N6M6 819 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 PDPRQ8NCN5 879 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 ACTRT2Q8TDY3 377 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 PTCD3Q96EY7 689 aaKnown RBP4.02□□□□□ -1.77
CD46-215ENST00000488596 APIPQ96GX9 242 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 VKORC1Q9BQB6 163 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 LRRC27Q9C0I9 530 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 REXO4Q9GZR2 422 aaKnown RBP4.02□□□□□ -1.77
CD46-215ENST00000488596 NUP62CLQ9H1M0 184 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 SACM1LQ9NTJ5 587 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 ASB6Q9NWX5 421 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 STK32BQ9NY57 414 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 PHTF1Q9UMS5 762 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 CORO2BQ9UQ03 480 aa4.02□□□□□ -1.77
CD46-215ENST00000488596 RHPN2P1A8MT19 583 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 BTN3A1O00481 513 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 PROP1O75360 226 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 DNAJB5O75953 348 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 ZFPL1O95159 310 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 UNC5CO95185 931 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 KIF20AO95235 890 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 RARBP10826 455 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 FCER1AP12319 257 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 ARFIP2P53365 341 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 PROK1P58294 105 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 CTBP1Q13363 440 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 HABP2Q14520 560 aaPredicted RBP4.01□□□□□ -1.77
CD46-215ENST00000488596 C3orf38Q5JPI3 329 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 EMC10Q5UCC4 262 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.01□□□□□ -1.77
CD46-215ENST00000488596 SLC30A10Q6XR72 485 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 SESTD1Q86VW0 696 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 PDSS2Q86YH6 399 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 PHKBQ93100 1093 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 SLC39A13Q96H72 371 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 LRIG1Q96JA1 1093 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 MPHOSPH6Q99547 160 aaKnown RBP4.01□□□□□ -1.77
CD46-215ENST00000488596 TRIM54Q9BYV2 358 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 SLC29A3Q9BZD2 475 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 ZNF287Q9HBT7 754 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 KCTD5Q9NXV2 234 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 FNIP2Q9P278 1114 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 SLC17A6Q9P2U8 582 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms