RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SCN1AP35498 2009 aa13.51□□□□□ -0.25
NELFE-209ENST00000488426 ZNF623O75123 536 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 AMHP03971 560 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 RAP1GAPP47736 663 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 RAD23BP54727 409 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 CDH8P55286 799 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 DSC3Q14574 896 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 ZNF394Q53GI3 561 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 C11orf63Q6NUN7 778 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 MRPL10Q7Z7H8 261 aaKnown RBP13.5□□□□□ -0.25
NELFE-209ENST00000488426 DAAM2Q86T65 1068 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 PHF13Q86YI8 300 aaPredicted RBP13.5□□□□□ -0.25
NELFE-209ENST00000488426 MCOLN2Q8IZK6 566 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 GDPD5Q8WTR4 605 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 CYFIP2Q96F07 1278 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 RPGRIP1Q96KN7 1286 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 COL25A1Q9BXS0 654 aaPredicted RBP13.5□□□□□ -0.25
NELFE-209ENST00000488426 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 BARX2Q9UMQ3 279 aaPredicted RBP13.5□□□□□ -0.25
NELFE-209ENST00000488426 GIT1Q9Y2X7 761 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 TTC3P53804 2025 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 PIRO00625 290 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 CES2O00748 559 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 BUB1BO60566 1050 aaPredicted RBP13.5□□□□□ -0.25
NELFE-209ENST00000488426 EFCAB14O75071 495 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 SKIP12755 728 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 BRD2P25440 801 aaKnown RBP13.5□□□□□ -0.25
NELFE-209ENST00000488426 LRPAP1P30533 357 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 CDH5P33151 784 aaPredicted RBP13.5□□□□□ -0.25
NELFE-209ENST00000488426 C1QBPQ07021 282 aaKnown RBP13.5□□□□□ -0.25
NELFE-209ENST00000488426 RPS6KA1Q15418 735 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 MON1BQ7L1V2 547 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 PEX26Q7Z412 305 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 TMEM35BQ8NCS4 154 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 LRRN4CLQ8ND94 238 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 WHAMMQ8TF30 809 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 TMEM176AQ96HP8 235 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 PPP1R10Q96QC0 940 aaKnown RBP13.5□□□□□ -0.25
NELFE-209ENST00000488426 RNF14Q9UBS8 474 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 CNOT8Q9UFF9 292 aaKnown RBP13.5□□□□□ -0.25
NELFE-209ENST00000488426 COG5Q9UP83 839 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 CEP83Q9Y592 693 aa13.5□□□□□ -0.25
NELFE-209ENST00000488426 CTAGE15A4D2H0 777 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 PTGESO14684 152 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 NCK2O43639 380 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 SRGAP2O75044 1071 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 KIF4AO95239 1232 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 CTAGE8P0CG41 777 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 LIN9Q5TKA1 542 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 CTAGE6Q86UF2 777 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 NT5DC3Q86UY8 548 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 PASD1Q8IV76 773 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 CTAGE4Q8IX94 777 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 SLC4A11Q8NBS3 891 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 CPA5Q8WXQ8 436 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 UBXN4Q92575 508 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 GOLGA1Q92805 767 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 RPS6KC1Q96S38 1066 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 MMS19Q96T76 1030 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 NUP85Q9BW27 656 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 LHX5Q9H2C1 402 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 GDAP2Q9NXN4 497 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 AMFRQ9UKV5 643 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 KIAA1257Q9ULG3 409 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 INSL6Q9Y581 213 aa13.49□□□□□ -0.25
NELFE-209ENST00000488426 PPEF2O14830 753 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 MGEA5O60502 916 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 CFHP08603 1231 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 ERVK-21P61565 698 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 SV2CQ496J9 727 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 RSRC2Q7L4I2 434 aaKnown RBP13.48□□□□□ -0.25
NELFE-209ENST00000488426 ZNF572Q7Z3I7 529 aaPredicted RBP13.48□□□□□ -0.25
NELFE-209ENST00000488426 CREG2Q8IUH2 290 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 CRIPAKQ8N1N5 446 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 ZNF564Q8TBZ8 553 aaPredicted RBP13.48□□□□□ -0.25
NELFE-209ENST00000488426 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
NELFE-209ENST00000488426 TFAP2BQ92481 460 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 APBB2Q92870 758 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 ZSWIM1Q9BR11 485 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 ELOVL4Q9GZR5 314 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 SNX9Q9Y5X1 595 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 A0A0U1RQF3 1178 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 ATMINO43313 823 aaPredicted RBP13.48□□□□□ -0.25
NELFE-209ENST00000488426 LINC00271P0C7V0 271 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 VDRP11473 427 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 CD19P15391 556 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 MMP8P22894 467 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 TAF6P49848 677 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 GATMP50440 423 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 NDST1P52848 882 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 SOX4Q06945 474 aaPredicted RBP13.48□□□□□ -0.25
NELFE-209ENST00000488426 STILQ15468 1287 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 FAM43BQ6ZT52 329 aaPredicted RBP13.48□□□□□ -0.25
NELFE-209ENST00000488426 PGBD4Q96DM1 585 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 HES6Q96HZ4 224 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 PBKQ96KB5 322 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 TWNKQ96RR1 684 aa13.48□□□□□ -0.25
NELFE-209ENST00000488426 TGS1Q96RS0 853 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms