RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 CLMNQ96JQ2 1002 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 PRRX2Q99811 253 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 ARHGAP39Q9C0H5 1083 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 FZD1Q9UP38 647 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 DMRT1Q9Y5R6 373 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 ARAP2Q8WZ64 1704 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 TCF20Q9UGU0 1960 aaKnown RBP5.93□□□□□ -1.46
BRCA1-217ENST00000487825 SPEF2Q9C093 1822 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 AK9Q5TCS8 1911 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 AKR1B10O60218 316 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 ABHD16AO95870 558 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 ITGB1P05556 798 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 CAPN2P17655 700 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 ZFP36P26651 326 aaKnown RBP5.92□□□□□ -1.46
BRCA1-217ENST00000487825 RNASE9P60153 205 aaKnown RBP5.92□□□□□ -1.46
BRCA1-217ENST00000487825 TMPRSS15P98073 1019 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 PRKG1Q13976 671 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 STAT4Q14765 748 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 TIGD2Q4W5G0 525 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 LY6G5CQ5SRR4 150 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 PRAMEF14Q5SWL7 426 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 RHOUQ7L0Q8 258 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 SYT12Q8IV01 421 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 ZNF34Q8IZ26 560 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 RNF169Q8NCN4 708 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 REPS2Q8NFH8 660 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 OR10H5Q8NGA6 315 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 ZNF480Q8WV37 535 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 AGAP2Q99490 1192 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 EYA3Q99504 573 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 CDX2Q99626 313 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-217ENST00000487825 POLLQ9UGP5 575 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 XIRP2A4UGR9 3374 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 FAM205AQ6ZU69 1335 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 FRMPD3Q5JV73 1810 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 REV3LO60673 3130 aa5.92□□□□□ -1.46
BRCA1-217ENST00000487825 TMEM191CA6NGB0 347 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 WNT10BO00744 389 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 BRINP1O60477 761 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 SGPL1O95470 568 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 HMOX1P09601 288 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 LAG3P18627 525 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 PTPN7P35236 360 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 NHLH2Q02577 135 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 KIF22Q14807 665 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 PTPAQ15257 358 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 SMN1Q16637 294 aaKnown RBP5.91□□□□□ -1.46
BRCA1-217ENST00000487825 MFSD14BQ5SR56 506 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 MBNL2Q5VZF2 373 aaKnown RBP5.91□□□□□ -1.46
BRCA1-217ENST00000487825 EFCAB12Q6NXP0 572 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 KCNV1Q6PIU1 500 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 LRRC55Q6ZSA7 311 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 LHFPL2Q6ZUX7 228 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 PDZD4Q76G19 769 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-217ENST00000487825 PPP1R42Q7Z4L9 355 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 GDF7Q7Z4P5 450 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 APOBEC3FQ8IUX4 373 aaKnown RBP5.91□□□□□ -1.46
BRCA1-217ENST00000487825 AFAP1L2Q8N4X5 818 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 FBXO18Q8NFZ0 1043 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 TSPEARQ8WU66 669 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 LMBR1Q8WVP7 490 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 RIN2Q8WYP3 895 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-217ENST00000487825 TFAP2CQ92754 450 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 TEX101Q9BY14 249 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 ZMYND8Q9ULU4 1186 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-217ENST00000487825 CLCA2Q9UQC9 943 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 RIPOR2Q9Y4F9 1068 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 DLG5Q8TDM6 1919 aa5.91□□□□□ -1.46
BRCA1-217ENST00000487825 TBKBP1A7MCY6 615 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 B5MCH6 92 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 LPXNO60711 386 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 NCR1O76036 304 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 GASTP01350 101 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 CNGA1P29973 690 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 CRHR1P34998 444 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 UBXN2AP68543 259 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 PARP10Q53GL7 1025 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 TOR2AQ5JU69 321 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 BTNL9Q6UXG8 535 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 KIF6Q6ZMV9 814 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 SLC35B2Q8TB61 432 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 AUTS2Q8WXX7 1259 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 PAWRQ96IZ0 340 aaKnown RBP5.9□□□□□ -1.46
BRCA1-217ENST00000487825 DCLRE1CQ96SD1 692 aaKnown RBP5.9□□□□□ -1.46
BRCA1-217ENST00000487825 SLC46A2Q9BY10 475 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 IFT122Q9HBG6 1241 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 C14orf119Q9NWQ9 140 aa5.9□□□□□ -1.46
BRCA1-217ENST00000487825 WDFY4Q6ZS81 3184 aa5.9□□□□□ -1.47
BRCA1-217ENST00000487825 CENPVL1A0A0U1RR11 272 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 ZNF185O15231 689 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 TLR2O60603 784 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 PHF2O75151 1096 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 NDUFA10O95299 355 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 CTGFP29279 349 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 GPSM2P81274 684 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 MRPS9P82933 396 aaKnown RBP5.89□□□□□ -1.47
BRCA1-217ENST00000487825 BMT2Q1RMZ1 405 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 MUM1Q2TAK8 710 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 MST1LQ2TV78 715 aa5.89□□□□□ -1.47
BRCA1-217ENST00000487825 DRICH1Q6PGQ1 229 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms