RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 THP07101 528 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 SSTR3P32745 418 aaPredicted RBP21.53■■□□□ 1.04
PHF1-209ENST00000487667 RPL9P32969 192 aaKnown RBP21.53■■□□□ 1.04
PHF1-209ENST00000487667 GPD2P43304 727 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 ARHGAP17Q68EM7 881 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 OR6B3Q8NGW1 331 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 TNIP3Q96KP6 325 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 SNX25Q9H3E2 840 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 SART1O43290 800 aaKnown RBP21.53■■□□□ 1.04
PHF1-209ENST00000487667 PSMC1P62191 440 aaKnown RBP21.53■■□□□ 1.04
PHF1-209ENST00000487667 ACAP1Q15027 740 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 SOWAHAQ2M3V2 549 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 TRIM71Q2Q1W2 868 aaKnown RBP21.53■■□□□ 1.04
PHF1-209ENST00000487667 PTPN20Q4JDL3 420 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 LHX8Q68G74 356 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 KLHL7Q8IXQ5 586 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 CRYBG2Q8N1P7 616 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 SLC43A3Q8NBI5 491 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 STK32AQ8WU08 396 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 MRPL45Q9BRJ2 306 aaKnown RBP21.53■■□□□ 1.04
PHF1-209ENST00000487667 AP1M1Q9BXS5 423 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 CXCL16Q9H2A7 254 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 ACBD3Q9H3P7 528 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 GDF3Q9NR23 364 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 TSPAN16Q9UKR8 245 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 L1RE1Q9UN81 338 aa21.53■■□□□ 1.04
PHF1-209ENST00000487667 A8MXQ7 604 aa21.52■■□□□ 1.04
PHF1-209ENST00000487667 PTGESO14684 152 aa21.52■■□□□ 1.04
PHF1-209ENST00000487667 PPEF2O14830 753 aa21.52■■□□□ 1.04
PHF1-209ENST00000487667 HEXIM1O94992 359 aaKnown RBP21.52■■□□□ 1.04
PHF1-209ENST00000487667 KRT3P12035 628 aa21.52■■□□□ 1.04
PHF1-209ENST00000487667 CHRNA3P32297 505 aa21.52■■□□□ 1.04
PHF1-209ENST00000487667 PDCLQ13371 301 aa21.52■■□□□ 1.04
PHF1-209ENST00000487667 DHX34Q14147 1143 aaKnown RBP21.52■■□□□ 1.04
PHF1-209ENST00000487667 C2CD6Q53TS8 623 aa21.52■■□□□ 1.04
PHF1-209ENST00000487667 KATNAL2Q8IYT4 538 aa21.52■■□□□ 1.04
PHF1-209ENST00000487667 STARD7Q9NQZ5 370 aa21.52■■□□□ 1.04
PHF1-209ENST00000487667 DMGDHQ9UI17 866 aaKnown RBP21.52■■□□□ 1.04
PHF1-209ENST00000487667 A0A0U1RQF3 1178 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 KBTBD13C9JR72 458 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 WARSP23381 471 aaKnown RBP21.51■■□□□ 1.03
PHF1-209ENST00000487667 GNL1P36915 607 aaPredicted RBP21.51■■□□□ 1.03
PHF1-209ENST00000487667 LILRA4P59901 499 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 DSC3Q14574 896 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 LPIN1Q14693 890 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 EMBQ6PCB8 327 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 SLC13A5Q86YT5 568 aaPredicted RBP21.51■■□□□ 1.03
PHF1-209ENST00000487667 MCEEQ96PE7 176 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 AGO3Q9H9G7 860 aaKnown RBP21.51■■□□□ 1.03
PHF1-209ENST00000487667 CYLDQ9NQC7 956 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 PRDM10Q9NQV6 1147 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 SCN1AP35498 2009 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 GHRP10912 638 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 PYGMP11217 842 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 CD52P31358 61 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 EPHB4P54760 987 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 GPS2Q13227 327 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 ZNF211Q13398 564 aaPredicted RBP21.51■■□□□ 1.03
PHF1-209ENST00000487667 CUL1Q13616 776 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 PHLDB2Q86SQ0 1253 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 ZDHHC17Q8IUH5 632 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 MCRS1Q96EZ8 462 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 TSPYL2Q9H2G4 693 aaPredicted RBP21.51■■□□□ 1.03
PHF1-209ENST00000487667 HOMER3Q9NSC5 361 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 TRMT13Q9NUP7 481 aaKnown RBP21.51■■□□□ 1.03
PHF1-209ENST00000487667 PHF24Q9UPV7 400 aa21.51■■□□□ 1.03
PHF1-209ENST00000487667 MARCKSL1P49006 195 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 SOX4Q06945 474 aaPredicted RBP21.5■■□□□ 1.03
PHF1-209ENST00000487667 XYLT1Q86Y38 959 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 TMEM86AQ8N2M4 240 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 TMEM130Q8N3G9 435 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 EXD1Q8NHP7 514 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 SPATA18Q8TC71 538 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 SH3TC2Q8TF17 1288 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 DDX27Q96GQ7 796 aaKnown RBP21.5■■□□□ 1.03
PHF1-209ENST00000487667 RBM41Q96IZ5 413 aaKnown RBP21.5■■□□□ 1.03
PHF1-209ENST00000487667 CPXM1Q96SM3 734 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 FUT8Q9BYC5 575 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 RAB17Q9H0T7 212 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 DDX56Q9NY93 547 aaKnown RBP21.5■■□□□ 1.03
PHF1-209ENST00000487667 RASAL2Q9UJF2 1139 aa21.5■■□□□ 1.03
PHF1-209ENST00000487667 A0A1W2PQ45 241 aaPredicted RBP21.49■■□□□ 1.03
PHF1-209ENST00000487667 A0A1W2PQY0 241 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 FAM187AA6NFU0 413 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 FSCN2O14926 492 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 RAD51CO43502 376 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 PHF2O75151 1096 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 SEC31AO94979 1220 aaKnown RBP21.49■■□□□ 1.03
PHF1-209ENST00000487667 DESP17661 470 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 RPL7AP62424 266 aaKnown RBP21.49■■□□□ 1.03
PHF1-209ENST00000487667 ORC1Q13415 861 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 NNTQ13423 1086 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 GOLGA7BQ2TAP0 167 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 POLNQ7Z5Q5 900 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 ACOT1Q86TX2 421 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 HDAC7Q8WUI4 952 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 GAD1Q99259 594 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 NCAPGQ9BPX3 1015 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 TRIM7Q9C029 511 aa21.49■■□□□ 1.03
PHF1-209ENST00000487667 VIPAS39Q9H9C1 493 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms