RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 ATP2C2O75185 946 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 CLSTN1O94985 981 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 AOC1P19801 751 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 CYP2F1P24903 491 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 LMO2P25791 158 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 ATICP31939 592 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 GPR15P49685 360 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 NUBP1P53384 320 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 PTPN5P54829 565 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 CLDN10P78369 228 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 FAM160A1Q05DH4 1040 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 SNW1Q13573 536 aaKnown RBP21.88■■□□□ 1.09
HDAC4-209ENST00000487617 CCDC142Q17RM4 750 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 ARHGAP15Q53QZ3 475 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 TDRD10Q5VZ19 366 aaKnown RBP21.88■■□□□ 1.09
HDAC4-209ENST00000487617 ENGASEQ8NFI3 743 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 SYAP1Q96A49 352 aaPredicted RBP21.88■■□□□ 1.09
HDAC4-209ENST00000487617 MRPL45Q9BRJ2 306 aaKnown RBP21.88■■□□□ 1.09
HDAC4-209ENST00000487617 SNX25Q9H3E2 840 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 CDH9Q9ULB4 789 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 MUC6Q6W4X9 2439 aa21.88■■□□□ 1.09
HDAC4-209ENST00000487617 STAU1O95793 577 aaKnown RBP21.87■■□□□ 1.09
HDAC4-209ENST00000487617 C4BPAP04003 597 aaKnown RBP21.87■■□□□ 1.09
HDAC4-209ENST00000487617 PDGFRBP09619 1106 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 NR2F2P24468 414 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 VIPR2P41587 438 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 PSMC1P62191 440 aaKnown RBP21.87■■□□□ 1.09
HDAC4-209ENST00000487617 RPL10AP62906 217 aaKnown RBP21.87■■□□□ 1.09
HDAC4-209ENST00000487617 DLG4P78352 724 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 NHLH1Q02575 133 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 GRM2Q14416 872 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 SLC44A4Q53GD3 710 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 STXBP5Q5T5C0 1151 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 SDHAF4Q5VUM1 108 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 TMC2Q8TDI7 906 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 SHDQ96IW2 340 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 GCNAQ96QF7 691 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 XYLT2Q9H1B5 865 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 TRPV4Q9HBA0 871 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 RMND1Q9NWS8 449 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 NXF1Q9UBU9 619 aaKnown RBP21.87■■□□□ 1.09
HDAC4-209ENST00000487617 KMT2EQ8IZD2 1858 aa21.87■■□□□ 1.09
HDAC4-209ENST00000487617 GALR2O43603 387 aaPredicted RBP21.86■■□□□ 1.09
HDAC4-209ENST00000487617 TACC1O75410 805 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 CDC25CP30307 473 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 GNL1P36915 607 aaPredicted RBP21.86■■□□□ 1.09
HDAC4-209ENST00000487617 TCF15Q12870 199 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 NCOA4Q13772 614 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 NFIL3Q16649 462 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 DDR2Q16832 855 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 GPR158Q5T848 1215 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 PHLDB3Q6NSJ2 640 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 FAM171BQ6P995 826 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 VITQ6UXI7 678 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 C4orf50Q6ZRC1 276 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 SMYD4Q8IYR2 804 aaPredicted RBP21.86■■□□□ 1.09
HDAC4-209ENST00000487617 OR6B3Q8NGW1 331 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 FUBP3Q96I24 572 aaKnown RBP eCLIP21.86■■□□□ 1.09
HDAC4-209ENST00000487617 TRMT61BQ9BVS5 477 aaKnown RBP21.86■■□□□ 1.09
HDAC4-209ENST00000487617 IL21Q9HBE4 155 aa21.86■■□□□ 1.09
HDAC4-209ENST00000487617 MAPK13O15264 365 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 SMC2O95347 1197 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 FAM163BP0C2L3 166 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 CSH1P0DML2 217 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 CSH2P0DML3 217 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 RPL13P26373 211 aaKnown RBP21.85■■□□□ 1.09
HDAC4-209ENST00000487617 CYP4F8P98187 520 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 MAPRE1Q15691 268 aaKnown RBP21.85■■□□□ 1.09
HDAC4-209ENST00000487617 MLF2Q15773 248 aaPredicted RBP21.85■■□□□ 1.09
HDAC4-209ENST00000487617 ZNF699Q32M78 642 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 CFAP221Q4G0U5 840 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 SCN4BQ8IWT1 228 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 STKLD1Q8NE28 680 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 MYLPFQ96A32 169 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 E2F7Q96AV8 911 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 BRD9Q9H8M2 597 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 CRTAC1Q9NQ79 661 aa21.85■■□□□ 1.09
HDAC4-209ENST00000487617 MAGEC2Q9UBF1 373 aaPredicted RBP21.85■■□□□ 1.09
HDAC4-209ENST00000487617 HOOK1Q9UJC3 728 aaKnown RBP21.85■■□□□ 1.09
HDAC4-209ENST00000487617 CIZ1Q9ULV3 898 aaPredicted RBP21.85■■□□□ 1.09
HDAC4-209ENST00000487617 MAGED2Q9UNF1 606 aaPredicted RBP21.85■■□□□ 1.09
HDAC4-209ENST00000487617 HEPACAM2A8MVW5 462 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 AKAP3O75969 853 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 VNN1O95497 513 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 HMGA1P17096 107 aaKnown RBP21.84■■□□□ 1.09
HDAC4-209ENST00000487617 PSMC3P17980 439 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 VAMP7P51809 220 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 STARD6P59095 220 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 CYP27A1Q02318 531 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 PRKCQQ04759 706 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 ADAM9Q13443 819 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 GPIHBP1Q8IV16 184 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 ARID3BQ8IVW6 561 aaPredicted RBP21.84■■□□□ 1.09
HDAC4-209ENST00000487617 DEPDC1BQ8WUY9 529 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 TIGD1Q96MW7 591 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 GSDMAQ96QA5 445 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 MKNK1Q9BUB5 465 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 TASP1Q9H6P5 420 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 VRTNQ9H8Y1 702 aa21.84■■□□□ 1.09
HDAC4-209ENST00000487617 IKBKBO14920 756 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms